HHsearch alignment for GI: 255764470 and conserved domain: cd04803
>cd04803 CBS_pair_15 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.23 E-value=2.6e-10 Score=94.37 Aligned_cols=106 Identities=23% Similarity=0.329 Sum_probs=91.3
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCC------------CCCHHHHHH-CCCEEEC
Q ss_conf 899608999899999998579978888767855278888888876202024------------660168873-2743523
Q gi|255764470|r 316 IVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEE------------GSMNFKRSI-RKPLVVH 382 (523)
Q Consensus 316 i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~------------~~~~~~~li-r~~~~Vp 382 (523)
T Consensus 3 vvtv~~~~tl~~a~~~m~~~~i~~lpVvd~~-~~lvGiit~~Dil~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~ 81 (122)
T cd04803 3 VVTLSEDDSLADAEELMREHRIRHLPVVNED-GKLVGLLTQRDLLRAALSSLSDNGEESLTKERDVPVAEVMKTDVLTVT 81 (122)
T ss_pred CEEECCCCCHHHHHHHHHHCCCCEEEEECCC-CCEEEEEEHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHCCCCCEEEC
T ss_conf 1999896999999999997499789999089-868889659999999984376420121025358899996689986998
Q ss_pred CCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHH
Q ss_conf 8999899999885038627775228674256525999999
Q gi|255764470|r 383 ENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILE 422 (523)
Q Consensus 383 e~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE 422 (523)
T Consensus 82 ~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGiiT~~Dilk 121 (122)
T cd04803 82 PDTPLREAAEIMVENKIGCLPVVDDKGTLVGIITRSDFLR 121 (122)
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHEEE
T ss_conf 9998999999998568509999947998999999515564