HHsearch alignment for GI: 255764471 and conserved domain: COG1100

>COG1100 GTPase SAR1 and related small G proteins [General function prediction only].
Probab=99.29  E-value=9.8e-12  Score=98.03  Aligned_cols=156  Identities=22%  Similarity=0.328  Sum_probs=87.8

Q ss_pred             EEEEEEECCCCCHHHHHHHHHCCCCCC------CHHHHHHHHHCCCCEEEECCEEEEEEECHHCCCCCCCCCHHHHHHCC
Q ss_conf             038864035642567887652012110------00245665420231142034069998171104444430001110001
Q gi|255764471|r  204 LRIAVVGRPNVGKSTLINRLLGYNRLL------TGSQSGITRDSVSISWNWKNHPIEIFDTAGMRKPSRITESLEQKTVK  277 (470)
Q Consensus       204 i~~~~~G~pN~GKStl~N~l~~~~r~i------vs~~~GtTrD~i~~~~~~~~~~~~liDTaGirkk~~~~~~~E~~s~~  277 (470)
T Consensus         6 ~kivv~G~~g~GKTtl~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~-----~~~~~~~Dt~gq----------~~~~~~   70 (219)
T COG1100           6 FKIVVLGDGGVGKTTLLNRLVGDEFPEGYPPTIGNLDPAKTIEPYRR-----NIKLQLWDTAGQ----------EEYRSL   70 (219)
T ss_pred             EEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCC-----CEEEEEEECCCH----------HHHHHH
T ss_conf             79999999999889999999647676556761454043203622666-----002676767986----------999998


Q ss_pred             CCCEEEECCEEEEEECCCCC--CCHHHHHHHHHHHHC---CCCCCCEEEECCCCCCCHHHHHHHHH-------HHCCCC-
Q ss_conf             21001201205998455321--220212232000000---35766558944223354155566654-------201333-
Q gi|255764471|r  278 KSMQSVRTCETTIVLLDATI--PFEKQDLRIVDSVFN---TGHAVVLALNKWDMVSDKLNLLQDLR-------TKAIKN-  344 (470)
Q Consensus       278 ~t~~~i~~advvi~viDa~~--~~~~qd~~i~~~i~~---~~k~~iiv~NK~Dli~~~~~~~~~~~-------~~~~~~-  344 (470)
T Consensus        71 ~-~~y~~~~~~~l~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~iilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (219)
T COG1100          71 R-PEYYRGANGILIVYDSTLRESSDELTEEWLEELRELAPDDVPILLVGNKIDLFDEQSSSEEILNQLNREVVLLVLAPK  149 (219)
T ss_pred             H-HHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHH
T ss_conf             8-750438978999997620565788999999999874668867999697610554301367887753245300022234


Q ss_pred             --CCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHH
Q ss_conf             --200488311123453--3348589999999999
Q gi|255764471|r  345 --LPQIGDIYINTISGR--TGEGLDDLMVSVLEIN  375 (470)
Q Consensus       345 --~~~~~~~~i~~iSA~--~g~gi~~l~~~i~~~~  375 (470)
T Consensus       150 ~~~~~~~~~~~~~~s~~~~~~~~v~~~~~~~~~~~  184 (219)
T COG1100         150 AVLPEVANPALLETSAKSLTGPNVNELFKELLRKL  184 (219)
T ss_pred             HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             44233200044324210167878789999999999