HHsearch alignment for GI: 255764471 and conserved domain: COG1100
>COG1100 GTPase SAR1 and related small G proteins [General function prediction only].
Probab=99.29 E-value=9.8e-12 Score=98.03 Aligned_cols=156 Identities=22% Similarity=0.328 Sum_probs=87.8
Q ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCC------CHHHHHHHHHCCCCEEEECCEEEEEEECHHCCCCCCCCCHHHHHHCC
Q ss_conf 038864035642567887652012110------00245665420231142034069998171104444430001110001
Q gi|255764471|r 204 LRIAVVGRPNVGKSTLINRLLGYNRLL------TGSQSGITRDSVSISWNWKNHPIEIFDTAGMRKPSRITESLEQKTVK 277 (470)
Q Consensus 204 i~~~~~G~pN~GKStl~N~l~~~~r~i------vs~~~GtTrD~i~~~~~~~~~~~~liDTaGirkk~~~~~~~E~~s~~ 277 (470)
T Consensus 6 ~kivv~G~~g~GKTtl~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~-----~~~~~~~Dt~gq----------~~~~~~ 70 (219)
T COG1100 6 FKIVVLGDGGVGKTTLLNRLVGDEFPEGYPPTIGNLDPAKTIEPYRR-----NIKLQLWDTAGQ----------EEYRSL 70 (219)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCC-----CEEEEEEECCCH----------HHHHHH
T ss_conf 79999999999889999999647676556761454043203622666-----002676767986----------999998
Q ss_pred CCCEEEECCEEEEEECCCCC--CCHHHHHHHHHHHHC---CCCCCCEEEECCCCCCCHHHHHHHHH-------HHCCCC-
Q ss_conf 21001201205998455321--220212232000000---35766558944223354155566654-------201333-
Q gi|255764471|r 278 KSMQSVRTCETTIVLLDATI--PFEKQDLRIVDSVFN---TGHAVVLALNKWDMVSDKLNLLQDLR-------TKAIKN- 344 (470)
Q Consensus 278 ~t~~~i~~advvi~viDa~~--~~~~qd~~i~~~i~~---~~k~~iiv~NK~Dli~~~~~~~~~~~-------~~~~~~- 344 (470)
T Consensus 71 ~-~~y~~~~~~~l~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~iilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (219)
T COG1100 71 R-PEYYRGANGILIVYDSTLRESSDELTEEWLEELRELAPDDVPILLVGNKIDLFDEQSSSEEILNQLNREVVLLVLAPK 149 (219)
T ss_pred H-HHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHH
T ss_conf 8-750438978999997620565788999999999874668867999697610554301367887753245300022234
Q ss_pred --CCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHH
Q ss_conf --200488311123453--3348589999999999
Q gi|255764471|r 345 --LPQIGDIYINTISGR--TGEGLDDLMVSVLEIN 375 (470)
Q Consensus 345 --~~~~~~~~i~~iSA~--~g~gi~~l~~~i~~~~ 375 (470)
T Consensus 150 ~~~~~~~~~~~~~~s~~~~~~~~v~~~~~~~~~~~ 184 (219)
T COG1100 150 AVLPEVANPALLETSAKSLTGPNVNELFKELLRKL 184 (219)
T ss_pred HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 44233200044324210167878789999999999