HHsearch alignment for GI: 255764471 and conserved domain: PRK04004
>PRK04004 translation initiation factor IF-2; Validated.
Probab=99.78 E-value=2.5e-18 Score=142.47 Aligned_cols=162 Identities=20% Similarity=0.297 Sum_probs=118.0
Q ss_pred CEEEEEEECCCCCHHHHHHHHHCCCCCCCHHH-HHHHHHCCCCEEEEC------------------CEEEEEEECHHCCC
Q ss_conf 30388640356425678876520121100024-566542023114203------------------40699981711044
Q gi|255764471|r 203 PLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQ-SGITRDSVSISWNWK------------------NHPIEIFDTAGMRK 263 (470)
Q Consensus 203 ~i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~-~GtTrD~i~~~~~~~------------------~~~~~liDTaGirk 263 (470)
T Consensus 5 ~PIvtimGHVDhGKTsLLD~iR~t~--V~~~EaGGITQhIGA~~v~~~~~~~~~~~~~~~~~~~~~ipgllfiDTPG--- 79 (592)
T PRK04004 5 QPIVVVLGHVDHGKTTLLDKIRGTA--VAAKEAGGITQHIGATEVPIDVIEKIAGPLVKRLPLKLKIPGLLFIDTPG--- 79 (592)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCC--CCCCCCCCCCCEECEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEECCCC---
T ss_conf 9889997873777636899986287--73555776232306598412310110344334433234567755765996---
Q ss_pred CCCCCCHHHHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCC--------------
Q ss_conf 444300011100012100120120599845532122021223200000035766558944223354--------------
Q gi|255764471|r 264 PSRITESLEQKTVKKSMQSVRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSD-------------- 329 (470)
Q Consensus 264 k~~~~~~~E~~s~~~t~~~i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~-------------- 329 (470)
T Consensus 80 -------HeaFt~mR~RGa-~vtDiaILVVa~~dGv~pQT~EaI~~~k~~~vP~IVAiNKiDr~~gw~~~~~~~~~~~~~ 151 (592)
T PRK04004 80 -------HEAFSNLRKRGG-ALADIAILVVDINEGFQPQTIESLNILKSRKTPFVVAANKIDRIPGWKSVEGAPFLESFK 151 (592)
T ss_pred -------HHHHHHHHHHCC-CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
T ss_conf -------599999997367-457889999977888676279999999975998899986223566677676741123223
Q ss_pred --HHHHHHHHHHHCC---CC--------------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf --1555666542013---33--------------200488311123453334858999999999998
Q gi|255764471|r 330 --KLNLLQDLRTKAI---KN--------------LPQIGDIYINTISGRTGEGLDDLMVSVLEINKL 377 (470)
Q Consensus 330 --~~~~~~~~~~~~~---~~--------------~~~~~~~~i~~iSA~~g~gi~~l~~~i~~~~~~ 377 (470)
T Consensus 152 ~q~~~v~~~l~~~~~~vi~~l~e~G~~~e~~~~~~d~g~~v~~VpvSA~tGeGi~dLL~~i~~Laq~ 218 (592)
T PRK04004 152 KQSERVQAELEEKLYELIGELYELGFSADRFDRVSDFTKTVAIVPVSAKTGEGIPDLLMVLAGLAQR 218 (592)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 1738899999888888889998728763221454345881489978205689989999999999999