HHsearch alignment for GI: 255764471 and conserved domain: PRK05291
>PRK05291 trmE tRNA modification GTPase TrmE; Reviewed.
Probab=100.00 E-value=1.1e-39 Score=286.36 Aligned_cols=160 Identities=30% Similarity=0.569 Sum_probs=139.7
Q ss_pred CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEECHHCCCCCCCCCHHHHHH
Q ss_conf 33234443038864035642567887652012110002456654202311420340699981711044444300011100
Q gi|255764471|r 196 SVKNISKPLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHPIEIFDTAGMRKPSRITESLEQKT 275 (470)
Q Consensus 196 ~~~~~~~~i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~~~liDTaGirkk~~~~~~~E~~s 275 (470)
T Consensus 209 ~g~~l~~G~~v~i~G~PN~GKSSL~N~L~~~drAIVS~ipGTTRD~ie~~l~l~G~~v~l~DTAGiR~---t~d~IE~~G 285 (445)
T PRK05291 209 QGELLREGLKVVIAGRPNVGKSSLLNALLGEERAIVTDIAGTTRDVIEEHINLDGIPLRLIDTAGIRE---TEDEVEKIG 285 (445)
T ss_pred HHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEECCEEEEEEECCCCCC---CCCHHHHHH
T ss_conf 41786359869988999876899999985787467318999740402236899998999998997665---574588999
Q ss_pred CCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 01210012012059984553212202122320000003576655894422335415556665420133320048831112
Q gi|255764471|r 276 VKKSMQSVRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINT 355 (470)
Q Consensus 276 ~~~t~~~i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 355 (470)
T Consensus 286 I~ra~~~~~~ADlil~v~D~s~~~~~~~~~~~~~~--~~~~~i~V~NK~DL~~~~~-----------------~~~~~i~ 346 (445)
T PRK05291 286 IERSRKAIEEADLVLLVLDASEPLTEEDKEILEEF--KNKPVIVVLNKADLTGEKI-----------------DGLPVIR 346 (445)
T ss_pred HHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHC--CCCCEEEEEEHHHCCCCCC-----------------CCCCEEE
T ss_conf 99999999839999999879988872259999851--7998799985120466534-----------------7897599
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 3453334858999999999998
Q gi|255764471|r 356 ISGRTGEGLDDLMVSVLEINKL 377 (470)
Q Consensus 356 iSA~~g~gi~~l~~~i~~~~~~ 377 (470)
T Consensus 347 iSak~g~Gi~~L~~~i~~~~~~ 368 (445)
T PRK05291 347 ISAKTGEGIDELEEALKQLVGF 368 (445)
T ss_pred EECCCCCCHHHHHHHHHHHHHC
T ss_conf 9837886999999999999704