HHsearch alignment for GI: 255764471 and conserved domain: TIGR00231

>TIGR00231 small_GTP small GTP-binding protein domain; InterPro: IPR005225 Proteins with a small GTP-binding domain include Ras, RhoA, Rab11, translation elongation factor G, translation initiation factor IF-2, tetratcycline resistance protein TetM, CDC42, Era, ADP-ribosylation factors, tdhF, and many others . In some proteins the domain occurs more than once. Among them there is a large number of small GTP-binding proteins and related domains in larger proteins. Note that the alpha chains of heterotrimeric G proteins are larger proteins in which the NKXD motif is separated from the GxxxxGK[ST] motif (P-loop) by a long insert and are not easily detected by this model.; GO: 0005525 GTP binding.
Probab=99.63  E-value=3.2e-16  Score=128.28  Aligned_cols=168  Identities=30%  Similarity=0.436  Sum_probs=123.3

Q ss_pred             CEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHH--HHHHHCCCCEEEECC-----------EEEEEEECHHCCCCCCCCC
Q ss_conf             303886403564256788765201211000245--665420231142034-----------0699981711044444300
Q gi|255764471|r  203 PLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQS--GITRDSVSISWNWKN-----------HPIEIFDTAGMRKPSRITE  269 (470)
Q Consensus       203 ~i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~--GtTrD~i~~~~~~~~-----------~~~~liDTaGirkk~~~~~  269 (470)
T Consensus         3 ~~~~~~~g~~~~Gk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~d~~G~~~~~~~~-   81 (186)
T TIGR00231         3 DIKIGIVGDPNVGKSTLLNRLLGNKGSITESGPTDGTTRDYVTESIEEDGKTITGATFQWGYKFNLLDTPGLHRQEDYD-   81 (186)
T ss_pred             CEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHEEEEEECCEEEEEEEEECCEEEEEEECCCCHHHHHHH-
T ss_conf             5058997347766045554454101200102323332000000113455802343431024278986257711355554-


Q ss_pred             HHHHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf             01110001210012012059984553212202122320000003576655894422335415556665420133320048
Q gi|255764471|r  270 SLEQKTVKKSMQSVRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIG  349 (470)
Q Consensus       270 ~~E~~s~~~t~~~i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~  349 (470)
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~  161 (186)
T TIGR00231        82 ALRRLYYPEVLSSLEVLDLVILVLDVEDGLEKDTKEIIHHADKYGVPILLVGNKIDLKDEKPGYFVDLKPHLASLFAKLN  161 (186)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHC
T ss_conf             45433223445444333333322211100102567787532212741699851336554675401000034555555423


Q ss_pred             CCC-CCCCCCCCCCCHHHHHHHH
Q ss_conf             831-1123453334858999999
Q gi|255764471|r  350 DIY-INTISGRTGEGLDDLMVSV  371 (470)
Q Consensus       350 ~~~-i~~iSA~~g~gi~~l~~~i  371 (470)
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~  184 (186)
T TIGR00231       162 GEPHFIPLSAETGKGIDSLFGLV  184 (186)
T ss_pred             CCCCEEECCHHHHCCHHHHHHHH
T ss_conf             66401111001110045566654