HHsearch alignment for GI: 255764471 and conserved domain: TIGR01393
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=99.88 E-value=3.5e-23 Score=175.20 Aligned_cols=153 Identities=27% Similarity=0.399 Sum_probs=106.0
Q ss_pred CCHHHHHHHHHCCCEEE--------------ECCCCCCEEEEEEEEEEE------CCEEEEEEECCCCCCCCHHHHHHHH
Q ss_conf 87888999985885010--------------258985302238999998------9989999965884207636899999
Q gi|255764471|r 13 VGKSTLFNRLVKKKMAV--------------VGNHPGITRDRLYGQAII------NGVIFNIVDTAGIADGKNCSIAKQM 72 (470)
Q Consensus 13 vGKStL~N~l~~~~~ai--------------v~~~~g~Trd~~~~~~~~------~~~~~~liDT~G~~~~~~~~~~~~i 72 (470)
T Consensus 14 HGKSTLADRlle~T~~~s~R~m~~Q~LD~MDlERERGITIK~qaV~l~Yk~~~DGe~Y~LNLIDTPGHVD-----FsYEV 88 (598)
T TIGR01393 14 HGKSTLADRLLEKTGAVSEREMREQVLDSMDLERERGITIKAQAVRLKYKVAKDGETYVLNLIDTPGHVD-----FSYEV 88 (598)
T ss_pred CCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCEEECCCCEEECCCEEEEEEEECCCCEEEEEEECCCCCCC-----CCHHH
T ss_conf 8932488999986174562025430577510000058201156347533753388788996452889721-----27378
Q ss_pred HHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHH-HH-HCCCCCCCCCHHHHCCCHHHHH--HHHHHH-HCC--CCCEEEH
Q ss_conf 999999998779899997598877623445553-32-1023322220565223012100--124553-122--2201001
Q gi|255764471|r 73 NDQTELAINEAHLILFLIDSKAGITPYDHAITS-FL-RKKNIPIIIVSNKMDTRIAQRN--FYEIYS-LDF--KEIVEIS 145 (470)
Q Consensus 73 ~~~~~~ai~~aD~il~vvD~~~g~~~~D~~i~~-~l-r~~~~~~ilv~NK~D~~~~~~~--~~e~~~-lg~--~~~i~iS 145 (470)
T Consensus 89 SR----SLAACEGALL~VDA~QGvEAQ--T~aN~YlAlE~dLeIIPViNKIDLP~Adpe~v~~eIe~~iGld~~~ai~~S 162 (598)
T TIGR01393 89 SR----SLAACEGALLLVDAAQGVEAQ--TLANVYLALENDLEIIPVINKIDLPSADPERVKKEIEEVIGLDASEAILAS 162 (598)
T ss_pred HH----HHHHHCCEEEEEECCCCHHHH--HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 88----888716403561410323588--899998875618758477825368888858999987654188964303875
Q ss_pred HHCCCCCHHHHHHHHHHHHHC--CCC-CCHHHHH
Q ss_conf 110222014799999986101--234-5112210
Q gi|255764471|r 146 AEHDLGTSELHSVIFKIFKQK--YPN-HPLEMIE 176 (470)
Q Consensus 146 A~~g~Gi~~L~~~i~~~~~~~--~~~-~~~e~~e 176 (470)
T Consensus 163 AKtG~Gi~e~LEaIv~~vPpP~Gd~~DapLkALI 196 (598)
T TIGR01393 163 AKTGIGIEEILEAIVKRVPPPKGDPDDAPLKALI 196 (598)
T ss_pred ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEE
T ss_conf 0367888999889710181001138886632278