HHsearch alignment for GI: 255764471 and conserved domain: TIGR03598

>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB. Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes.
Probab=100.00  E-value=9.3e-36  Score=259.89  Aligned_cols=154  Identities=24%  Similarity=0.303  Sum_probs=117.0

Q ss_pred             CCEEEEEEECCCCCHHHHHHHHHCCCC-CCCHHHHHHHHHCCCCEEEECCEEEEEEECHHC--CC-----CCCCCCHHHH
Q ss_conf             430388640356425678876520121-100024566542023114203406999817110--44-----4443000111
Q gi|255764471|r  202 KPLRIAVVGRPNVGKSTLINRLLGYNR-LLTGSQSGITRDSVSISWNWKNHPIEIFDTAGM--RK-----PSRITESLEQ  273 (470)
Q Consensus       202 ~~i~~~~~G~pN~GKStl~N~l~~~~r-~ivs~~~GtTrD~i~~~~~~~~~~~~liDTaGi--rk-----k~~~~~~~E~  273 (470)
T Consensus        17 ~~p~IaivGrpNvGKSTL~N~L~g~k~~a~vs~~pGtTr~i~---~~~~~~~~~lvDtpGyG~~~~~~~~~~~~~~~~~~   93 (179)
T TIGR03598        17 DGPEIAFAGRSNVGKSSLINALTNRKKLARTSKTPGRTQLIN---FFEVNDGFRLVDLPGYGYAKVSKEEKEKWQKLIEE   93 (179)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECC---EEEECCCEEEEECCCHHHCCCCHHHHHHHHHHHHH
T ss_conf             897899986999888999999868985589708997366023---20104736999777602112788889999999999


Q ss_pred             HHCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCC-CCCC
Q ss_conf             000121001201205998455321220212232000000357665589442233541555666542013332004-8831
Q gi|255764471|r  274 KTVKKSMQSVRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQI-GDIY  352 (470)
Q Consensus       274 ~s~~~t~~~i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~-~~~~  352 (470)
T Consensus        94 ~~-----~~~~~l~~villiDa~~gl~~~D~~i~~~l~~~~kp~iivlNK~Dll~~~~--~~~~~~~i~~~l~~~~~~~~  166 (179)
T TIGR03598        94 YL-----RGRENLKGVVLLMDIRHPLKELDLEMLEWLDERGIPVLIVLTKADKLKKSE--RNKQLKKIKKALKKDADDPS  166 (179)
T ss_pred             HH-----HHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH--HHHHHHHHHHHHHCCCCCCC
T ss_conf             99-----998864302898743779989999999999975998899997813069899--99999999999733668894


Q ss_pred             CCCCCCCCCCCHH
Q ss_conf             1123453334858
Q gi|255764471|r  353 INTISGRTGEGLD  365 (470)
Q Consensus       353 i~~iSA~~g~gi~  365 (470)
T Consensus       167 v~~ISA~~g~GID  179 (179)
T TIGR03598       167 VQLFSSLKKTGIE  179 (179)
T ss_pred             EEEEECCCCCCCC
T ss_conf             8999799983879