HHsearch alignment for GI: 255764471 and conserved domain: cd00882
>cd00882 Ras_like_GTPase Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulate initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Memb
Probab=99.61 E-value=1.1e-14 Score=117.87 Aligned_cols=144 Identities=26% Similarity=0.233 Sum_probs=98.4
Q ss_pred EECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCE--EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 97189887888999985885010258985302238999998998--9999965884207636899999999999998779
Q gi|255764471|r 7 IVGAPNVGKSTLFNRLVKKKMAVVGNHPGITRDRLYGQAIINGV--IFNIVDTAGIADGKNCSIAKQMNDQTELAINEAH 84 (470)
Q Consensus 7 ivG~pNvGKStL~N~l~~~~~aiv~~~~g~Trd~~~~~~~~~~~--~~~liDT~G~~~~~~~~~~~~i~~~~~~ai~~aD 84 (470)
T Consensus 1 vvG~~~~GKSsl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~-----~-~---~~~~~~~~~ 70 (157)
T cd00882 1 VVGDSGVGKTSLLNRLLGGEF-VPEEYETTIIDFYSKTIEVDGKKVKLQIWDTAGQERFR-----S-L---RRLYYRGAD 70 (157)
T ss_pred CCCCCCCCHHHHHHHHHCCCC-CCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCHHHH-----H-H---HHHHHHHCC
T ss_conf 929499688999999971988-87646871578999999999999999999858951156-----7-8---999975357
Q ss_pred EEEEEECCCCCCCHHHHH-----HHHHHHCCCCCCCCCHHHHCCCHHHHHHHH-----HHHHCCCCCEEEHHHCCCCCHH
Q ss_conf 899997598877623445-----553321023322220565223012100124-----5531222201001110222014
Q gi|255764471|r 85 LILFLIDSKAGITPYDHA-----ITSFLRKKNIPIIIVSNKMDTRIAQRNFYE-----IYSLDFKEIVEISAEHDLGTSE 154 (470)
Q Consensus 85 ~il~vvD~~~g~~~~D~~-----i~~~lr~~~~~~ilv~NK~D~~~~~~~~~e-----~~~lg~~~~i~iSA~~g~Gi~~ 154 (470)
T Consensus 71 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~iiiv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~i~~ 150 (157)
T cd00882 71 GIILVYDVTDRESFENVKEWLLLILINKEGENIPIILVGNKIDLPEERVVSEEELAEQLAKELGVPYFETSAKTGENVEE 150 (157)
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHH
T ss_conf 99999865888889999999999999752589849999853561540668899999999987898699984788839999
Q ss_pred HHHHHH
Q ss_conf 799999
Q gi|255764471|r 155 LHSVIF 160 (470)
Q Consensus 155 L~~~i~ 160 (470)
T Consensus 151 l~~~i~ 156 (157)
T cd00882 151 LFEELA 156 (157)
T ss_pred HHHHHH
T ss_conf 999985