HHsearch alignment for GI: 255764471 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=99.91 E-value=1.9e-24 Score=183.71 Aligned_cols=154 Identities=25% Similarity=0.388 Sum_probs=98.3
Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCHHH--------------HHHHHHCCCCEEEECCE-----EEEEEECHHCCCCC
Q ss_conf 388640356425678876520121100024--------------56654202311420340-----69998171104444
Q gi|255764471|r 205 RIAVVGRPNVGKSTLINRLLGYNRLLTGSQ--------------SGITRDSVSISWNWKNH-----PIEIFDTAGMRKPS 265 (470)
Q Consensus 205 ~~~~~G~pN~GKStl~N~l~~~~r~ivs~~--------------~GtTrD~i~~~~~~~~~-----~~~liDTaGirkk~ 265 (470)
T Consensus 2 NiaiiGHvd~GKTTL~~~ll~~tg~i~~~~~~~~~~D~~~~E~eRgiTi~~~~~~~~~~~~~~~~~~in~iDtPG----- 76 (179)
T cd01890 2 NFSIIAHIDHGKSTLADRLLELTGTVSKREMKEQVLDSMDLERERGITIKAQTVRLNYKAKDGQEYLLNLIDTPG----- 76 (179)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEECCC-----
T ss_conf 599994899898999999999859954145732441651767863866874336888413678714899998998-----
Q ss_pred CCCCHHHHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 43000111000121001201205998455321220212232000000357665589442233541555666542013332
Q gi|255764471|r 266 RITESLEQKTVKKSMQSVRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNL 345 (470)
Q Consensus 266 ~~~~~~E~~s~~~t~~~i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~ 345 (470)
T Consensus 77 -----h~dF~-~~~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~p~ivviNKiD~~~ad~---~~v~~~i~~~~ 147 (179)
T cd01890 77 -----HVDFS-YEVSRSLAACEGALLLVDATQGVEAQTLANFYLALENNLEIIPVINKIDLPSADP---ERVKQQIEDVL 147 (179)
T ss_pred -----CCCCH-HHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH---HHHHHHHHHHH
T ss_conf -----64517-7898899754427899864778737489999999876998899986555677899---99999999986
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 0048831112345333485899999999
Q gi|255764471|r 346 PQIGDIYINTISGRTGEGLDDLMVSVLE 373 (470)
Q Consensus 346 ~~~~~~~i~~iSA~~g~gi~~l~~~i~~ 373 (470)
T Consensus 148 g-~~~~~~v~vSA~~g~gv~~Ll~~i~~ 174 (179)
T cd01890 148 G-LDPSEAILVSAKTGLGVEDLLEAIVE 174 (179)
T ss_pred C-CCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 8-89767488437889798999999996