HHsearch alignment for GI: 255764471 and conserved domain: cd01892

>cd01892 Miro2 Miro2 subfamily. Miro (mitochondrial Rho) proteins have tandem GTP-binding domains separated by a linker region containing putative calcium-binding EF hand motifs. Genes encoding Miro-like proteins were found in several eukaryotic organisms. This CD represents the putative GTPase domain in the C terminus of Miro proteins. These atypical Rho GTPases have roles in mitochondrial homeostasis and apoptosis. Most Rho proteins contain a lipid modification site at the C-terminus; however, Miro is one of few Rho subfamilies that lack this feature.
Probab=99.68  E-value=1.9e-16  Score=129.74  Aligned_cols=160  Identities=13%  Similarity=0.110  Sum_probs=101.1

Q ss_pred             CCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEE--EEEEECHHCCCCCCCCCHHHHHHCCCC
Q ss_conf             430388640356425678876520121100024566542023114203406--999817110444443000111000121
Q gi|255764471|r  202 KPLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHP--IEIFDTAGMRKPSRITESLEQKTVKKS  279 (470)
Q Consensus       202 ~~i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~--~~liDTaGirkk~~~~~~~E~~s~~~t  279 (470)
T Consensus         3 ~vfk~~VlG~~~VGKTsLi~rf~~~~f~~~~y~~Ti~~~~~~k~v~v~g~~~~L~i~Dt~g----------~e~~~~l~-   71 (169)
T cd01892           3 NVFLCFVLGAKGSGKSALLRAFLGRSFSLNAYSPTIKPRYAVNTVEVYGQEKYLILREVGE----------DEVAILLN-   71 (169)
T ss_pred             EEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEECCC----------CHHHHHHH-
T ss_conf             0899999999998899999999649998666567546618999999899999999985565----------32355665-


Q ss_pred             CEEEECCEEEEEECCCCCCCHHHH--HHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             001201205998455321220212--232000000357665589442233541555666542013332004883111234
Q gi|255764471|r  280 MQSVRTCETTIVLLDATIPFEKQD--LRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTIS  357 (470)
Q Consensus       280 ~~~i~~advvi~viDa~~~~~~qd--~~i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~iS  357 (470)
T Consensus        72 ~~~~~~ad~~ilVyDit~~~SF~~i~~~~~~~~~~~~iP~vlVgNK~DL~~~rqV~~~e~~~~a-~~---~~~~~~~e~S  147 (169)
T cd01892          72 DAELAACDVACLVYDSSDPKSFSYCAEVYKKYFMLGEIPCLFVAAKADLDEQQQRYEVQPDEFC-RK---LGLPPPLHFS  147 (169)
T ss_pred             HHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH-HH---CCCCCCEEEE
T ss_conf             8875469889999979987899999999997005689818999886554203754677699999-98---3999666998


Q ss_pred             CCCCCCHHHHHHHHHHHHH
Q ss_conf             5333485899999999999
Q gi|255764471|r  358 GRTGEGLDDLMVSVLEINK  376 (470)
Q Consensus       358 A~~g~gi~~l~~~i~~~~~  376 (470)
T Consensus       148 Aktg~nv~~~F~~la~~a~  166 (169)
T cd01892         148 SKLGDSSNELFTKLATAAQ  166 (169)
T ss_pred             EECCCCHHHHHHHHHHHHH
T ss_conf             3279898999999999976