>cd01893 Miro1 Miro1 subfamily. Miro (mitochondrial Rho) proteins have tandem GTP-binding domains separated by a linker region containing putative calcium-binding EF hand motifs. Genes encoding Miro-like proteins were found in several eukaryotic organisms. This CD represents the N-terminal GTPase domain of Miro proteins. These atypical Rho GTPases have roles in mitochondrial homeostasis and apoptosis. Most Rho proteins contain a lipid modification site at the C-terminus; however, Miro is one of few Rho subfamilies that lack this feature.

Probab=99.68 E-value=1.2e-16 Score=131.01 Aligned_cols=156 Identities=16% Similarity=0.189 Sum_probs=100.1 Q ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCE--EEEEEECHHCCCCCCCCCHHHHHHCCCCCE Q ss_conf 038864035642567887652012110002456654202311420340--699981711044444300011100012100 Q gi|255764471|r 204 LRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNH--PIEIFDTAGMRKPSRITESLEQKTVKKSMQ 281 (470) Q Consensus 204 i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~--~~~liDTaGirkk~~~~~~~E~~s~~~t~~ 281 (470) T Consensus 1 lKiv~vGd~~VGKTsli~r~~~~~F--~~~~~-~t~~~~~~~~~~~~~~v~l~i~DtaG~----------e~~~~~-~~~ 66 (166) T cd01893 1 VRIVLIGDEGVGKSSLIMSLVSEEF--PENVP-RVLPEITIPADVTPERVPTTIVDTSSR----------PQDRAN-LAA 66 (166) T ss_pred CEEEEECCCCCCHHHHHHHHHHCCC--CCCCC-CCCCCEEEEEEECCEEEEEEEEECCCC----------CCCCHH-HHH T ss_conf 9899999999899999999984978--88777-634568999998890999999989987----------230245-798 Q ss_pred EEECCEEEEEECCCCCCCHHHHH--HHHHHHH--CCCCCCCEEEECCCCCCCHHHHH-HHHHHHCCCCCCCCCCCCCCCC Q ss_conf 12012059984553212202122--3200000--03576655894422335415556-6654201333200488311123 Q gi|255764471|r 282 SVRTCETTIVLLDATIPFEKQDL--RIVDSVF--NTGHAVVLALNKWDMVSDKLNLL-QDLRTKAIKNLPQIGDIYINTI 356 (470) Q Consensus 282 ~i~~advvi~viDa~~~~~~qd~--~i~~~i~--~~~k~~iiv~NK~Dli~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i 356 (470) T Consensus 67 ~~~~a~~~ilvydit~~~Sf~~i~~~w~~~i~~~~~~~piilvGNK~DL~~~r~~~~~e~~~~~~~~~~~~~--~~~~Et 144 (166) T cd01893 67 EIRKANVICLVYSVDRPSTLERIRTKWLPLIRRLGVKVPIILVGNKSDLRDGSSQAGLEEEMLPIMNEFREI--ETCVEC 144 (166) T ss_pred HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC--CEEEEE T ss_conf 736898899997089877899999999999998689996899998865400250335889999999973074--889990 Q ss_pred CCCCCCCHHHHHHHHHHHH Q ss_conf 4533348589999999999 Q gi|255764471|r 357 SGRTGEGLDDLMVSVLEIN 375 (470) Q Consensus 357 SA~~g~gi~~l~~~i~~~~ 375 (470) T Consensus 145 SAktg~nV~e~F~~~~k~~ 163 (166) T cd01893 145 SAKTLINVSEVFYYAQKAV 163 (166) T ss_pred CCCCCCCHHHHHHHHHHHH T ss_conf 6588919899999999998

HHsearch alignment for GI: 255764471 and conserved domain: cd01893