HHsearch alignment for GI: 255764471 and conserved domain: cd01895
>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=100.00 E-value=8.6e-38 Score=273.61 Aligned_cols=161 Identities=34% Similarity=0.447 Sum_probs=138.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCC--HHHHHHHHHHHHHHHH
Q ss_conf 08999718988788899998588501025898530223899999899899999658842076--3689999999999999
Q gi|255764471|r 3 YTIAIVGAPNVGKSTLFNRLVKKKMAVVGNHPGITRDRLYGQAIINGVIFNIVDTAGIADGK--NCSIAKQMNDQTELAI 80 (470)
Q Consensus 3 ~~iaivG~pNvGKStL~N~l~~~~~aiv~~~~g~Trd~~~~~~~~~~~~~~liDT~G~~~~~--~~~~~~~i~~~~~~ai 80 (470)
T Consensus 3 ~~V~ivG~pN~GKSTL~N~l~g~~~~~vs~~pgtTr~~~~~~~~~~~~~~~~vDtpGi~~~~~~~~~~e~~~~~~~~~~i 82 (174)
T cd01895 3 IRIAIIGRPNVGKSSLVNALLGEERVIVSDIAGTTRDSIDVPFEYDGKKYTLIDTAGIRRKGKVEEGIEKYSVLRTLKAI 82 (174)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCEEECCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 89999989999899999998389844434999915733289999999889998578842134421068899999999999
Q ss_pred HHCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHH-----HH----HHHHCCCCCEEEHHHCCCC
Q ss_conf 87798999975988776234455533210233222205652230121001-----24----5531222201001110222
Q gi|255764471|r 81 NEAHLILFLIDSKAGITPYDHAITSFLRKKNIPIIIVSNKMDTRIAQRNF-----YE----IYSLDFKEIVEISAEHDLG 151 (470)
Q Consensus 81 ~~aD~il~vvD~~~g~~~~D~~i~~~lr~~~~~~ilv~NK~D~~~~~~~~-----~e----~~~lg~~~~i~iSA~~g~G 151 (470)
T Consensus 83 ~~~dvil~viDa~~~~~~~d~~i~~~l~~~~~p~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~ii~iSA~~g~G 162 (174)
T cd01895 83 ERADVVLLVIDATEGITEQDLRIAGLILEEGKALVIVVNKWDLVEKDSKTMKEFKKEIRRKLPFLDYAPIVFISALTGQG 162 (174)
T ss_pred HHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
T ss_conf 84286589975898998899999999998599869998567526764778999999999873416899289997447989
Q ss_pred CHHHHHHHHHHH
Q ss_conf 014799999986
Q gi|255764471|r 152 TSELHSVIFKIF 163 (470)
Q Consensus 152 i~~L~~~i~~~~ 163 (470)
T Consensus 163 i~~L~~~I~ei~ 174 (174)
T cd01895 163 VDKLFDAIDEVY 174 (174)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999869