HHsearch alignment for GI: 255764471 and conserved domain: cd01898
>cd01898 Obg Obg subfamily. The Obg nucleotide binding protein subfamily has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins conserved from bacteria to humans. The E. coli homolog, ObgE is believed to function in ribosomal biogenesis. Members of the subfamily contain two equally and highly conserved domains, a C-terminal GTP binding domain and an N-terminal glycine-rich domain.
Probab=100.00 E-value=2.6e-32 Score=236.68 Aligned_cols=157 Identities=27% Similarity=0.356 Sum_probs=119.5
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEEC-CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 899971898878889999858850102589853022389999989-9899999658842076368999999999999987
Q gi|255764471|r 4 TIAIVGAPNVGKSTLFNRLVKKKMAVVGNHPGITRDRLYGQAIIN-GVIFNIVDTAGIADGKNCSIAKQMNDQTELAINE 82 (470)
Q Consensus 4 ~iaivG~pNvGKStL~N~l~~~~~aiv~~~~g~Trd~~~~~~~~~-~~~~~liDT~G~~~~~~~~~~~~i~~~~~~ai~~ 82 (470)
T Consensus 2 ~VAiiG~pNvGKSTLlN~l~~~~~~-V~~~pgTT~~~~~g~i~~~~~~~i~~~DtpGi~~~~~~--~~~l~~~~l~~i~~ 78 (170)
T cd01898 2 DVGLVGLPNAGKSTLLSAISNAKPK-IADYPFTTLVPNLGVVRVDDGRSFVVADIPGLIEGASE--GKGLGHRFLRHIER 78 (170)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCCE-EECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCC--CCCHHHHHHHCCCC
T ss_conf 5899899999899999999678760-32566652374477999369856999648864445546--62248999861334
Q ss_pred CCEEEEEECCCCCCCHHH--HHHHHHHHC-----CCCCCCCCHHHHCCCHHHHHH---HHH-HHHCCCCCEEEHHHCCCC
Q ss_conf 798999975988776234--455533210-----233222205652230121001---245-531222201001110222
Q gi|255764471|r 83 AHLILFLIDSKAGITPYD--HAITSFLRK-----KNIPIIIVSNKMDTRIAQRNF---YEI-YSLDFKEIVEISAEHDLG 151 (470)
Q Consensus 83 aD~il~vvD~~~g~~~~D--~~i~~~lr~-----~~~~~ilv~NK~D~~~~~~~~---~e~-~~lg~~~~i~iSA~~g~G 151 (470)
T Consensus 79 advil~vvD~~~~~~~~~~~~~i~~~l~~~~~~~~~kp~ilv~NK~Dl~~~~~~~~~~~~~~~~~~~~~vi~iSA~~g~g 158 (170)
T cd01898 79 TRLLLHVIDLSGDDDPVEDYKTIRNELELYNPELLEKPRIVVLNKIDLLDEEELFELLKELLKELWGKPVFPISALTGEG 158 (170)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 56179999899878989999999999998274440386506776202428356389999999856999589997547979
Q ss_pred CHHHHHHHHHHH
Q ss_conf 014799999986
Q gi|255764471|r 152 TSELHSVIFKIF 163 (470)
Q Consensus 152 i~~L~~~i~~~~ 163 (470)
T Consensus 159 i~~L~~~I~~~L 170 (170)
T cd01898 159 LDELLRKLAELL 170 (170)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999669