>cd04104 p47_IIGP_like p47 (47-kDa) family. The p47 GTPase family consists of several highly homologous proteins, including IGTP, TGTP/Mg21, IRG-47, GTPI, LRG-47, and IIGP1. They are found in higher eukaryotes where they play a role in immune resistance against intracellular pathogens. p47 proteins exist at low resting levels in mouse cells, but are strongly induced by Type II interferon (IFN-gamma). ITGP is critical for resistance to Toxoplasma gondii infection and in involved in inhibition of Coxsackievirus-B3-induced apoptosis. TGTP was shown to limit vesicular stomatitis virus (VSV) infection of fibroblasts in vitro. IRG-47 is involved in resistance to T. gondii infection. LRG-47 has been implicated in resistance to T. gondii, Listeria monocytogenes, Leishmania, and mycobacterial infections. IIGP1 has been shown to localize to the ER and to the Golgi membranes in IFN-induced cells and inflamed tissues. In macrophages, IIGP1 interacts with hook3, a microtubule binding protei

Probab=99.39 E-value=1.4e-12 Score=103.82 Aligned_cols=160 Identities=21% Similarity=0.323 Sum_probs=93.0 Q ss_pred CEEEEEEECCCCCHHHHHHHHHC-----CCCCCCHHHHHHHHHCCCCEEEECCE-EEEEEECHHCCCCCCCCCHHHHHHC Q ss_conf 30388640356425678876520-----12110002456654202311420340-6999817110444443000111000 Q gi|255764471|r 203 PLRIAVVGRPNVGKSTLINRLLG-----YNRLLTGSQSGITRDSVSISWNWKNH-PIEIFDTAGMRKPSRITESLEQKTV 276 (470) Q Consensus 203 ~i~~~~~G~pN~GKStl~N~l~~-----~~r~ivs~~~GtTrD~i~~~~~~~~~-~~~liDTaGirkk~~~~~~~E~~s~ 276 (470) T Consensus 1 pl~iaVtGesGaGKSSfINAlRGl~~~d~~aA~tGv~-eTT~~~~--~Y~~p~~pnv~lwDlPG~G---t~~f~~~~Yl~ 74 (197) T cd04104 1 PLNIAVTGESGAGKSSFINALRGVGHEEEGAAPTGVV-ETTMKRT--PYPHPKFPNVTLWDLPGIG---STAFPPDDYLE 74 (197) T ss_pred CEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCCE--ECCCCCCCCCEEECCCCCC---CCCCCHHHHHH T ss_conf 9179995589986899999986889887775888887-4677862--0479999987697289999---87659899998 Q ss_pred CCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCC-----------HHHHHHHHHHHCCCCC Q ss_conf 12100120120599845532122021223200000035766558944223354-----------1555666542013332 Q gi|255764471|r 277 KKSMQSVRTCETTIVLLDATIPFEKQDLRIVDSVFNTGHAVVLALNKWDMVSD-----------KLNLLQDLRTKAIKNL 345 (470) Q Consensus 277 ~~t~~~i~~advvi~viDa~~~~~~qd~~i~~~i~~~~k~~iiv~NK~Dli~~-----------~~~~~~~~~~~~~~~~ 345 (470) T Consensus 75 ~---~~~~~yD~fiiis--s~rf~~nd~~la~~i~~~gK~fyfVRsK~D~dl~n~~~~~p~~f~~e~~L~~IR~~c~~~L 149 (197) T cd04104 75 E---MKFSEYDFFIIIS--STRFSSNDVKLAKAIQCMGKKFYFVRTKVDRDLSNEQRSKPRSFNREQVLQEIRDNCLENL 149 (197) T ss_pred H---CCCCCCCEEEEEE--CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 6---5855457899983--8864142699999999809928999861214000566378766599999999999999999 Q ss_pred CCCC--CCCCCCCCCC--CCCCHHHHHHHHHH Q ss_conf 0048--8311123453--33485899999999 Q gi|255764471|r 346 PQIG--DIYINTISGR--TGEGLDDLMVSVLE 373 (470) Q Consensus 346 ~~~~--~~~i~~iSA~--~g~gi~~l~~~i~~ 373 (470) T Consensus 150 ~~~gv~~p~VFLvS~~~~~~yDFp~L~~tl~~ 181 (197) T cd04104 150 QEAGVSEPPVFLVSNFDPSDYDFPKLRETLLK 181 (197) T ss_pred HHCCCCCCCEEEEECCCCCCCCHHHHHHHHHH T ss_conf 98699999989993798220776899999999

HHsearch alignment for GI: 255764471 and conserved domain: cd04104