HHsearch alignment for GI: 255764471 and conserved domain: cd04137
>cd04137 RheB Rheb (Ras Homolog Enriched in Brain) subfamily. Rheb was initially identified in rat brain, where its expression is elevated by seizures or by long-term potentiation. It is expressed ubiquitously, with elevated levels in muscle and brain. Rheb functions as an important mediator between the tuberous sclerosis complex proteins, TSC1 and TSC2, and the mammalian target of rapamycin (TOR) kinase to stimulate cell growth. TOR kinase regulates cell growth by controlling nutrient availability, growth factors, and the energy status of the cell. TSC1 and TSC2 form a dimeric complex that has tumor suppressor activity, and TSC2 is a GTPase activating protein (GAP) for Rheb. The TSC1/TSC2 complex inhibits the activation of TOR kinase through Rheb. Rheb has also been shown to induce the formation of large cytoplasmic vacuoles in a process that is dependent on the GTPase cycle of Rheb, but independent of the TOR kinase, suggesting Rheb plays a role in endocytic trafficking that le
Probab=99.68 E-value=2.1e-16 Score=129.52 Aligned_cols=152 Identities=20% Similarity=0.208 Sum_probs=97.2
Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEE--EEEEECHHCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf 388640356425678876520121100024566542023114203406--999817110444443000111000121001
Q gi|255764471|r 205 RIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHP--IEIFDTAGMRKPSRITESLEQKTVKKSMQS 282 (470)
Q Consensus 205 ~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~--~~liDTaGirkk~~~~~~~E~~s~~~t~~~ 282 (470)
T Consensus 3 KIvlvGd~~VGKTsli~r~~~~~f--~~~y~~Ti~~~~~k~i~~~~~~~~l~iwDtaG~----------e~~~~~~-~~~ 69 (180)
T cd04137 3 KIAVLGSRSVGKSSLTVQFVEGHF--VESYYPTIENTFSKIIRYKGQDYHLEIVDTAGQ----------DEYSILP-QKY 69 (180)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCC--CCCCCCCCCCCCCEEEEECCEEEEEEEEECCCC----------CCCCHHH-HHH
T ss_conf 899999899889999999970978--998588124411379999999999999989987----------0100667-999
Q ss_pred EECCEEEEEECCCCCCCHHHHH--H---HHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 2012059984553212202122--3---2000000357665589442233541555666542013332004883111234
Q gi|255764471|r 283 VRTCETTIVLLDATIPFEKQDL--R---IVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTIS 357 (470)
Q Consensus 283 i~~advvi~viDa~~~~~~qd~--~---i~~~i~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~iS 357 (470)
T Consensus 70 ~~~a~~~ilvydvt~~~Sf~~~~~~~~~~~~~~~~~~~piilVgNK~DL~~~r~V~~~e~~-~~a~~----~~~~f~EtS 144 (180)
T cd04137 70 SIGIHGYILVYSVTSRKSFEVVKVIYDKILDMLGKESVPIVLVGNKSDLHTQRQVSTEEGK-ELAES----WGAAFLESS 144 (180)
T ss_pred HHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCHHHHH-HHHHH----CCCEEEEEC
T ss_conf 8635578999743887889999999999999758888867977653462440788999999-99998----399899977
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 53334858999999999
Q gi|255764471|r 358 GRTGEGLDDLMVSVLEI 374 (470)
Q Consensus 358 A~~g~gi~~l~~~i~~~ 374 (470)
T Consensus 145 Ak~g~nV~e~F~~l~~~ 161 (180)
T cd04137 145 ARENENVEEAFELLIEE 161 (180)
T ss_pred CCCCCCHHHHHHHHHHH
T ss_conf 68891989999999999