HHsearch alignment for GI: 255764471 and conserved domain: cd04146

>cd04146 RERG_RasL11_like RERG/RasL11-like subfamily. RERG (Ras-related and Estrogen- Regulated Growth inhibitor) and Ras-like 11 are members of a novel subfamily of Ras that were identified based on their behavior in breast and prostate tumors, respectively. RERG expression was decreased or lost in a significant fraction of primary human breast tumors that lack estrogen receptor and are correlated with poor clinical prognosis. Elevated RERG expression correlated with favorable patient outcome in a breast tumor subtype that is positive for estrogen receptor expression. In contrast to most Ras proteins, RERG overexpression inhibited the growth of breast tumor cells in vitro and in vivo. RasL11 was found to be ubiquitously expressed in human tissue, but down-regulated in prostate tumors. Both RERG and RasL11 lack the C-terminal CaaX prenylation motif, where a = an aliphatic amino acid and X = any amino acid, and are localized primarily in the cytoplasm. Both are believed to have tu
Probab=99.65  E-value=3.3e-16  Score=128.17  Aligned_cols=152  Identities=20%  Similarity=0.240  Sum_probs=96.5

Q ss_pred             EEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEE--EEEEECHHCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf             388640356425678876520121100024566542023114203406--999817110444443000111000121001
Q gi|255764471|r  205 RIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHP--IEIFDTAGMRKPSRITESLEQKTVKKSMQS  282 (470)
Q Consensus       205 ~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~--~~liDTaGirkk~~~~~~~E~~s~~~t~~~  282 (470)
T Consensus         1 Kiv~vGd~~VGKTsli~rf~~~~--f~~~y~~T~~~~~~~~~~v~~~~~~l~iwDtaG~----------e~~~~~~~~~~   68 (165)
T cd04146           1 KIAVLGASGVGKSALVVRFLTKR--FIGEYDPNLESLYSRQVTIDGEQVSLEILDTAGQ----------QQADTEQLERS   68 (165)
T ss_pred             CEEEECCCCCCHHHHHHHHHHCC--CCCCCCCCCCCEEEEEEEECCEEEEEEEEECCCC----------CCCCHHHHHHH
T ss_conf             99999989977899999997498--9987599556305799999999999999928985----------01220125543


Q ss_pred             EECCEEEEEECCCCCCCHHHHH-HHHHHH---H--CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             2012059984553212202122-320000---0--035766558944223354155566654201333200488311123
Q gi|255764471|r  283 VRTCETTIVLLDATIPFEKQDL-RIVDSV---F--NTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTI  356 (470)
Q Consensus       283 i~~advvi~viDa~~~~~~qd~-~i~~~i---~--~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~i  356 (470)
T Consensus        69 ~~~a~~~ilvydit~~~Sf~~~~~~~~~i~~~~~~~~~~piilVGNK~DL~~~r~Vs~ee~~~~-----a~~~~~~f~E~  143 (165)
T cd04146          69 IRWADGFVLVYSITDRSSFDEISQLKQLIREIKKRDREIPVILVGNKADLLHYRQVSTEEGEKL-----ASELGCLFFEV  143 (165)
T ss_pred             CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH-----HHHCCCEEEEE
T ss_conf             0458789999865888999999999999999846699953998445545210367799999999-----99819989997


Q ss_pred             CCCCC-CCHHHHHHHHHH
Q ss_conf             45333-485899999999
Q gi|255764471|r  357 SGRTG-EGLDDLMVSVLE  373 (470)
Q Consensus       357 SA~~g-~gi~~l~~~i~~  373 (470)
T Consensus       144 SAk~~~~~V~~~F~~l~~  161 (165)
T cd04146         144 SAAEDYDGVHSVFHELCR  161 (165)
T ss_pred             ECCCCCCCHHHHHHHHHH
T ss_conf             520878269999999999