HHsearch alignment for GI: 255764471 and conserved domain: pfam00025
>pfam00025 Arf ADP-ribosylation factor family. Pfam combines a number of different Prosite families together
Probab=99.82 E-value=5.9e-20 Score=153.43 Aligned_cols=158 Identities=19% Similarity=0.185 Sum_probs=104.1
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEECHHCCCCCCCCCHHHHHHCCC
Q ss_conf 34443038864035642567887652012110002456654202311420340699981711044444300011100012
Q gi|255764471|r 199 NISKPLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHPIEIFDTAGMRKPSRITESLEQKTVKK 278 (470)
Q Consensus 199 ~~~~~i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~~~liDTaGirkk~~~~~~~E~~s~~~ 278 (470)
T Consensus 10 ~~~k~~Ki~llG~~~vGKTsll~~~~~~~~~~~~pTig~~----~~~v~~~~~~~~iwDt~Gq----------e~~~~~- 74 (174)
T pfam00025 10 GLNKEMRILILGLDNAGKTTILYKLKLGEIVTTIPTIGFN----VETVTYKNVKFTVWDVGGQ----------ESLRPL- 74 (174)
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCE----EEEEEECCEEEEEEECCCC----------CCCCHH-
T ss_conf 7896669999999999889999999549988744746823----8999989999999827987----------023267-
Q ss_pred CCEEEECCEEEEEECCCCCCCHHHH--HHHHHHH---HCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 1001201205998455321220212--2320000---0035766558944223354155566654201333200488311
Q gi|255764471|r 279 SMQSVRTCETTIVLLDATIPFEKQD--LRIVDSV---FNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYI 353 (470)
Q Consensus 279 t~~~i~~advvi~viDa~~~~~~qd--~~i~~~i---~~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i 353 (470)
T Consensus 75 ~~~y~~~a~~ii~V~D~t~~~s~~~~~~~l~~~l~~~~~~~~piliv~NK~DL~~~~~--~~ei~~~~~~~~~~~~~~~~ 152 (174)
T pfam00025 75 WRNYFPNTDAVIFVVDSADRDRIEEAKEELHALLNEEELADAPLLILANKQDLPGAMS--EAEIRELLGLHELKSRPWEI 152 (174)
T ss_pred HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC--HHHHHHHHHHHHCCCCCCEE
T ss_conf 9988417826899986786787999999999987542358970899872566767899--99999999786441799689
Q ss_pred CCCCCCCCCCHHHHHHHHHH
Q ss_conf 12345333485899999999
Q gi|255764471|r 354 NTISGRTGEGLDDLMVSVLE 373 (470)
Q Consensus 354 ~~iSA~~g~gi~~l~~~i~~ 373 (470)
T Consensus 153 ~~~SAktG~gI~e~f~~L~~ 172 (174)
T pfam00025 153 QGCSAVTGEGLDEGLDWLSN 172 (174)
T ss_pred EEEECCCCCCHHHHHHHHHH
T ss_conf 99988679598999999995