HHsearch alignment for GI: 255764471 and conserved domain: pfam00071
>pfam00071 Ras Ras family. Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See pfam00009 pfam00025, pfam00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices.
Probab=99.73 E-value=6.1e-18 Score=139.82 Aligned_cols=153 Identities=18% Similarity=0.221 Sum_probs=90.3
Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEE--EEEEECHHCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf 388640356425678876520121100024566542023114203406--999817110444443000111000121001
Q gi|255764471|r 205 RIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHP--IEIFDTAGMRKPSRITESLEQKTVKKSMQS 282 (470)
Q Consensus 205 ~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~--~~liDTaGirkk~~~~~~~E~~s~~~t~~~ 282 (470)
T Consensus 1 Ki~vvG~~~vGKTsli~r~~~~~f-~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~----------e~~~~~-~~~~ 68 (162)
T pfam00071 1 KLVLVGDGGVGKSSLLIRFTQNKF-PEEYIPTIGVDFYTKTIEVDGKTVKLQIWDTAGQ----------ERFRAL-RPLY 68 (162)
T ss_pred CEEEECCCCCCHHHHHHHHHHCCC-CCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCC----------HHHHHH-HHHH
T ss_conf 989999799779999999961999-9874774135567899999999999999978987----------204678-8998
Q ss_pred EECCEEEEEECCCCCCCHHHH-HHHHHHHH---CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 201205998455321220212-23200000---03576655894422335415556665420133320048831112345
Q gi|255764471|r 283 VRTCETTIVLLDATIPFEKQD-LRIVDSVF---NTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTISG 358 (470)
Q Consensus 283 i~~advvi~viDa~~~~~~qd-~~i~~~i~---~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~iSA 358 (470)
T Consensus 69 ~~~ad~~iivfd~~~~~S~~~i~~~~~~i~~~~~~~~piilvgnK~Dl~~~~~i~~~e~~~-----~a~~~~~~y~e~Sa 143 (162)
T pfam00071 69 YRGAQGFLLVYDITSRDSFENVKKWLEEILRHADDNVPIVLVGNKCDLEDQRVVSTEEGEA-----LAKELGLPFMETSA 143 (162)
T ss_pred HCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCHHHHHH-----HHHHHCCEEEEECC
T ss_conf 6257655042348988999999999999998579886288997524746518899999999-----99980997999737
Q ss_pred CCCCCHHHHHHHHHHH
Q ss_conf 3334858999999999
Q gi|255764471|r 359 RTGEGLDDLMVSVLEI 374 (470)
Q Consensus 359 ~~g~gi~~l~~~i~~~ 374 (470)
T Consensus 144 k~g~gI~~~F~~i~~~ 159 (162)
T pfam00071 144 KTNENVEEAFEELARE 159 (162)
T ss_pred CCCCCHHHHHHHHHHH
T ss_conf 8882999999999999