HHsearch alignment for GI: 255764471 and conserved domain: smart00175
>smart00175 RAB Rab subfamily of small GTPases. Rab GTPases are implicated in vesicle trafficking.
Probab=99.65 E-value=5.3e-16 Score=126.76 Aligned_cols=153 Identities=18% Similarity=0.192 Sum_probs=89.8
Q ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCEE--EEEEECHHCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 0388640356425678876520121100024566542023114203406--99981711044444300011100012100
Q gi|255764471|r 204 LRIAVVGRPNVGKSTLINRLLGYNRLLTGSQSGITRDSVSISWNWKNHP--IEIFDTAGMRKPSRITESLEQKTVKKSMQ 281 (470)
Q Consensus 204 i~~~~~G~pN~GKStl~N~l~~~~r~ivs~~~GtTrD~i~~~~~~~~~~--~~liDTaGirkk~~~~~~~E~~s~~~t~~ 281 (470)
T Consensus 1 ~Ki~vvG~~~vGKTsli~r~~~~~f~-~~~~~Ti~~~~~~~~i~~~~~~~~l~iwDt~G----------~e~~~~l~-~~ 68 (164)
T smart00175 1 FKIILIGDSGVGKSSLLSRFTDGKFS-EQYKSTIGVDFKTKTIEVDGKRVKLQIWDTAG----------QERFRSIT-SS 68 (164)
T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCC-CCCCCCCCEEEEEEEEEECCEEEEEEEEECCC----------CHHHHHHH-HH
T ss_conf 98999998997799999999419999-98688456666779999999999999996799----------44664779-98
Q ss_pred EEECCEEEEEECCCCCCC--HHHHHHHHHHHH---CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 120120599845532122--021223200000---035766558944223354155566654201333200488311123
Q gi|255764471|r 282 SVRTCETTIVLLDATIPF--EKQDLRIVDSVF---NTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTI 356 (470)
Q Consensus 282 ~i~~advvi~viDa~~~~--~~qd~~i~~~i~---~~~k~~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 356 (470)
T Consensus 69 ~~~~~~~~ilvfdi~~~~Sf~~i~~w-~~~i~~~~~~~~piilvgnK~Dl~~~r~V~~~e~~~~-----a~~~~~~~~e~ 142 (164)
T smart00175 69 YYRGAVGALLVYDITNRESFENLKNW-LKELREYADPNVVIMLVGNKSDLEDQRQVSREEAEAF-----AEEHGLPFFET 142 (164)
T ss_pred HHCCCCEEEEECCCCCHHHHHHHHHH-HHHHHHHCCCCCCEEECCCCCCHHHHCCCCHHHHHHH-----HHHCCCEEEEE
T ss_conf 83366536884368998999999999-9999986799982551164568565187999999999-----99849979998
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 453334858999999999
Q gi|255764471|r 357 SGRTGEGLDDLMVSVLEI 374 (470)
Q Consensus 357 SA~~g~gi~~l~~~i~~~ 374 (470)
T Consensus 143 SAk~~~~v~e~F~~l~~~ 160 (164)
T smart00175 143 SAKTNTNVEEAFEELARE 160 (164)
T ss_pred CCCCCCCHHHHHHHHHHH
T ss_conf 316690889999999999