HHsearch alignment for GI: 255764471 and conserved domain: smart00177
>smart00177 ARF ARF-like small GTPases; ARF, ADP-ribosylation factor. Ras homologues involved in vesicular transport. Activator of phospholipase D isoforms. Unlike Ras proteins they lack cysteine residues at their C-termini and therefore are unlikely to be prenylated. ARFs are N-terminally myristoylated. Contains ATP/GTP-binding motif (P-loop).
Probab=99.64 E-value=2.2e-15 Score=122.57 Aligned_cols=149 Identities=19% Similarity=0.229 Sum_probs=98.9
Q ss_pred EEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 08999718988788899998588501025898530223899999899899999658842076368999999999999987
Q gi|255764471|r 3 YTIAIVGAPNVGKSTLFNRLVKKKMAVVGNHPGITRDRLYGQAIINGVIFNIVDTAGIADGKNCSIAKQMNDQTELAINE 82 (470)
Q Consensus 3 ~~iaivG~pNvGKStL~N~l~~~~~aiv~~~~g~Trd~~~~~~~~~~~~~~liDT~G~~~~~~~~~~~~i~~~~~~ai~~ 82 (470)
T Consensus 14 ~kililG~~~~GKTsil~~l~~~~~--~~~~p--Tvg~~~~~~~~~~~~l~iwD~~Gqe~---------~r~l~~~Yy~~ 80 (175)
T smart00177 14 MRILMVGLDAAGKTTILYKLKLGES--VTTIP--TIGFNVETVTYKNISFTVWDVGGQDK---------IRPLWRHYYTN 80 (175)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCC--CCCCC--CCCCEEEEEEECCEEEEEEECCCCCC---------CCHHHHHHCCC
T ss_conf 9999998899998999999965997--77579--78810799998989999998999854---------55367775577
Q ss_pred CCEEEEEECCCCCCC--HHHHHHHHHHHC---CCCCCCCCHHHHCCCHHHH--HHHHHHHHC-CC----CCEEEHHHCCC
Q ss_conf 798999975988776--234455533210---2332222056522301210--012455312-22----20100111022
Q gi|255764471|r 83 AHLILFLIDSKAGIT--PYDHAITSFLRK---KNIPIIIVSNKMDTRIAQR--NFYEIYSLD-FK----EIVEISAEHDL 150 (470)
Q Consensus 83 aD~il~vvD~~~g~~--~~D~~i~~~lr~---~~~~~ilv~NK~D~~~~~~--~~~e~~~lg-~~----~~i~iSA~~g~ 150 (470)
T Consensus 81 a~~iIfVvD~sd~~~~~~~~~~l~~~l~~~~~~~~piLil~NK~Dl~~~~~~~ei~~~l~l~~~~~~~~~i~~~SA~tG~ 160 (175)
T smart00177 81 TQGLIFVVDSNDRDRIDEAREELHRMLNEDELRDAVILVFANKQDLPDAMKAAEITEKLGLHSIRDRNWYIQPTCATSGD 160 (175)
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCHHHHCCCCEEEEEEECCCCC
T ss_conf 61899998668778999999999999631531698699998456676788999999996866540797599982687896
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 20147999999861
Q gi|255764471|r 151 GTSELHSVIFKIFK 164 (470)
Q Consensus 151 Gi~~L~~~i~~~~~ 164 (470)
T Consensus 161 GI~e~f~wL~~~ik 174 (175)
T smart00177 161 GLYEGLTWLSNNLK 174 (175)
T ss_pred CHHHHHHHHHHHHC
T ss_conf 98999999999844