HHsearch alignment for GI: 255764472 and conserved domain: PRK13762
>PRK13762 tRNA-modifying enzyme; Provisional.
Probab=97.02 E-value=0.0068 Score=41.31 Aligned_cols=171 Identities=13% Similarity=0.165 Sum_probs=90.6
Q ss_pred CCCCCCCCCCCC--HHHHHHH---HHHHHHHHHHHHHHHHHHC---CCCE-------EEEECCCCCEEEECCCCCCC---
Q ss_conf 233244681110--0122137---6410058899988763101---3310-------58731454113411344431---
Q gi|255764472|r 183 QEGCDKFCTFCV--VPYTRGI---EISRSLSQVVDEARKLIDN---GVCE-------ITLLGQNVNAWRGKGLDGEK--- 244 (469)
Q Consensus 183 ~~GC~~~CsfC~--ip~~RG~---~rSr~~~~Iv~ei~~l~~~---G~kE-------i~L~g~d~~~Y~g~~~~~~~--- 244 (469)
T Consensus 65 l~~C~~~CvfCWR~~~~~~~~~~~~~~DdPe~Ive~~i~~h~~li~g~kG~p~v~~er~~EA~~p~H~-AiSL~GEPtlY 143 (321)
T PRK13762 65 LAWCNQRCLFCWRPLEEDVGLLKPPEWDDPEEIVEESIKEQRKLLSGYKGNPKVDKEKFEEALEPKHV-AISLSGEPTLY 143 (321)
T ss_pred HHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHE-EHHHCCCCCCC
T ss_conf 77774448565689988876667788889899999999999999730589999898999872791001-02204886320
Q ss_pred CCCCHHHHHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCC---CCHHHHHHH
Q ss_conf 00021678862044430013544-21000100036652022111220133211145789987303334---411467899
Q gi|255764472|r 245 CTFSDLLYSLSEIKGLVRLRYTT-SHPRDMSDCLIKAHGDLDVLMPYLHLPVQSGSDRILKSMNRRHT---AYEYRQIID 320 (469)
Q Consensus 245 ~~l~~Ll~~l~~i~~~~riR~~s-~~P~~~~~~li~~~~~~~~i~~~lhlpiQSgs~~vLk~M~R~~~---~e~~~~~i~ 320 (469)
T Consensus 144 P~l~eLi~~~h~r-~-----~stFLVTNg~~P~~l~~l~~~P---TQLYvSldAp~~e~~k~i~rPl~~d~Wer~~~sL~ 214 (321)
T PRK13762 144 PRLPELIEEFHKR-G-----FTTFLVTNGTRPDVLEKLEAEP---TQLYVSLDAPDKETYNRINRPVIPDAWERILETLE 214 (321)
T ss_pred HHHHHHHHHHHHC-C-----CCEEEEECCCCHHHHHHCCCCC---CEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 2189999999857-9-----8379982898989998566765---42799800699999998616553318999999999
Q ss_pred HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 9874013443200000135220124789886332210111002000
Q gi|255764472|r 321 RIRSVRPDIAISSDFIVGFPGETDDDFRATMDLVDKIGYAQAFSFK 366 (469)
Q Consensus 321 ~~r~~~p~~~i~tdiIvGfPgETeedf~~Tl~~i~~~~~~~~~vf~ 366 (469)
T Consensus 215 ~L~~~~~RTV~R~TLVkg~Nm~~~~~yA~---Li~~~~P~FIEvK~ 257 (321)
T PRK13762 215 LLPSKKTRTVIRITLVKGLNMTDPEGYAK---LIERANPDFVEVKA 257 (321)
T ss_pred HHHCCCCCEEEEEEEECCCCCCCHHHHHH---HHHHCCCCEEEEEE
T ss_conf 75437987599998765657679899999---99854998798711