>TIGR01578 MiaB-like-B MiaB-like tRNA modifying enzyme, archaeal-type; InterPro: IPR006466 This clade of sequences is closely related to MiaB, a modifier of isopentenylated adenosine-37 of certain eukaryotic and bacterial tRNAs (see IPR006463 from INTERPRO). Sequence alignments suggest that this family of sequences perform the same chemical transformation as MiaB, perhaps on a different (or differently modified) tRNA base substrate. This clade represents a subfamily that spans the archaea and eukaryotes. The only archaeal miaB-like genes are in this group of sequences , , ..

Probab=100.00 E-value=0 Score=773.71 Aligned_cols=428 Identities=33% Similarity=0.533 Sum_probs=376.2 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHCCCEECC-CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE Q ss_conf 79999579856887899999999987986877-60108899992783250799999999999998767664218981899 Q gi|255764472|r 26 RFFVKSYGCQMNVYDSLRMEDMFFSQGYERVN-SMDDADLIVLNTCHIREKAAEKVYSFLGRIRNLKNSRIKEGGDLLVV 104 (469) Q Consensus 26 kv~i~TlGC~~N~~Dse~i~~~L~~~G~~~~~-~~~~ADviiINTCsV~~~ae~k~~~~i~~~~~~~~~~~k~~p~~~Iv 104 (469) T Consensus 1 kvy~E~yGC~~N~~~~~~~~~~L~~~G~~lv~~~~~EAD~~I~NtCtV~~~TE~~m~~rI~~l---~~~------Gk~vv 71 (487) T TIGR01578 1 KVYVETYGCTLNRADSEIIKNSLKKAGHELVNANAEEADVAILNTCTVKKKTEDKMLYRIKEL---KRK------GKEVV 71 (487) T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCEEEHHHHHHHHHHHHHH---HHC------CCEEE T ss_conf 967877313366134899999998717623038700051777514224014588999999866---328------95699 Q ss_pred EECCCCCCCHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCEECCC--CCCCCCCCCCCCCCCCCCCCCCCCEEEEEE Q ss_conf 964730108788987410011001100111316888753059700235--544112444333334575677772578741 Q gi|255764472|r 105 VAGCVAQAEGEEILRRSPIVNVVVGPQTYYRLPELLERARFGKRVVDT--DYSVEDKFERLSIVDGGYNRKRGVTAFLTI 182 (469) Q Consensus 105 VtGC~aq~~~e~l~~~~p~vd~vig~~~~~~i~~~i~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~ikI 182 (469) T Consensus 72 V~GC~P~~~~~~~~~~~~~~~-~~~~~~~~rl~e~ve~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~pI 150 (487) T TIGR01578 72 VAGCMPKAQKEEVKDADSEAE-VLGVKAIERLKELVEEILKRRSVQLLANKKKVLEESEAKTLLKEPEPRKNPLIEILPI 150 (487) T ss_pred EEECCCCHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCHHCCCHHHHCCCCCCCCCC T ss_conf 970244000123330353000-0000211578998877641023320268700110331310003202314677555543 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCC-CCHHHH-HHHCCCCC Q ss_conf 2332446811100122137641005889998876310133105873145411341134443100-021678-86204443 Q gi|255764472|r 183 QEGCDKFCTFCVVPYTRGIEISRSLSQVVDEARKLIDNGVCEITLLGQNVNAWRGKGLDGEKCT-FSDLLY-SLSEIKGL 260 (469) Q Consensus 183 ~~GC~~~CsfC~ip~~RG~~rSr~~~~Iv~ei~~l~~~G~kEi~L~g~d~~~Y~g~~~~~~~~~-l~~Ll~-~l~~i~~~ 260 (469) T Consensus 151 ~~GC~~~CsYCi~K~ARG~L~S~PpEkiV~~ar~l~~~G~kEI~iTs~DT~~Y-G~DiG---~~kLPeLL~~~~t~I~g~ 226 (487) T TIGR01578 151 NQGCLGNCSYCITKIARGKLASYPPEKIVEKARELVAEGAKEIWITSQDTAAY-GKDIG---ERKLPELLRRLITEIPGD 226 (487) T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCC-CCCCC---CCCCHHHHHHHHHHCCCC T ss_conf 66635688754677764452488722568999999970531265134466634-42237---621279999998625993 Q ss_pred CCCCCCCCCCCCC---CCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEC Q ss_conf 0013544210001---0003665202211122013321114578998730333441146789998740134432000001 Q gi|255764472|r 261 VRLRYTTSHPRDM---SDCLIKAHGDLDVLMPYLHLPVQSGSDRILKSMNRRHTAYEYRQIIDRIRSVRPDIAISSDFIV 337 (469) Q Consensus 261 ~riR~~s~~P~~~---~~~li~~~~~~~~i~~~lhlpiQSgs~~vLk~M~R~~~~e~~~~~i~~~r~~~p~~~i~tdiIv 337 (469) T Consensus 227 F~~RVGMmnP~~~~~IldeL~~v~~~h~kV~kFLHlPvQSGsD~VL~~M~R~y~v~~f~~Iv~~FR~~~~~~tl~TDiIv 306 (487) T TIGR01578 227 FRLRVGMMNPKNVLEILDELIEVFQSHDKVYKFLHLPVQSGSDSVLKEMKREYTVDDFEDIVEKFRERFPDLTLSTDIIV 306 (487) T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEE T ss_conf 27876258876334788999999854882000115420158758897448565257789999999876268647300167 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHCCCCCCHHHHHHHHHHHH---------------------- Q ss_conf 3522012478988633221011100200001112012321436889899999999999---------------------- Q gi|255764472|r 338 GFPGETDDDFRATMDLVDKIGYAQAFSFKYSPRLGTPGSNMLEQVDENVKAERLLCLQ---------------------- 395 (469) Q Consensus 338 GfPgETeedf~~Tl~~i~~~~~~~~~vf~yS~r~gT~Aa~m~~qV~~~vk~~R~~~l~---------------------- 395 (469) T Consensus 307 GFp~EtdddFE~T~~l~~k~RPe~In~~~fS~RpgT~Aa~~~-~~~~~i~K~Rs~~l~dlfysyePyadrvGeiytvlvt 385 (487) T TIGR01578 307 GFPTETDDDFEETMELLRKYRPEKINVTKFSPRPGTEAAKMK-RLDTNIKKKRSKALTDLFYSYEPYADRVGEIYTVLVT 385 (487) T ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHC-CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE T ss_conf 178988355899999999828983453024688887113305-8996201166677776542026300122415778775 Q ss_pred -------------HHHHHHHHHHHHHHCCCEEEEEEECCCC--CCCE-EEEECCCC----------CEEEECCCC---CC Q ss_conf -------------9999999999998579789999842568--0868-99998786----------288973887---67 Q gi|255764472|r 396 -------------KKLREQQVSFNDACVGQIIEVLIEKHGK--EKGK-LVGRSPWL----------QSVVLNSKN---HN 446 (469) Q Consensus 396 -------------~~~~~~~~~~~~~~iG~~~~Vlve~~~~--~~~~-~~G~t~~~----------~~V~~~~~~---~~ 446 (469) T Consensus 386 evshdklhyvGhnk~~~~~~~~~~~~~iG~~~~Vlv~~asKy~g~G~~~~~~d~~~rCaknqelPn~~Vv~~~~~dhGl~ 465 (487) T TIGR01578 386 EVSHDKLHYVGHNKLKEEVLLEKKENLIGKREKVLVTEASKYEGKGDSLKDEDDAYRCAKNQELPNRQVVISEKTDHGLE 465 (487) T ss_pred EEECCCEEECCHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCCCCCCEECCCHHHHHHHHCCCCCCCCEEEECCCCCCCC T ss_conf 31013101114056788751000110564010489973121024243144641456533105689854587248665664 Q ss_pred CCCEEEEEEEEEECCEEEEEEE Q ss_conf 6888999999830873899994 Q gi|255764472|r 447 IGDIIKVRITDVKISTLYGELV 468 (469) Q Consensus 447 ~G~~v~V~I~~~~~~~L~G~vi 468 (469) T Consensus 466 ~gef~~V~iT~~~~~~l~g~~i 487 (487) T TIGR01578 466 PGEFAKVEITGAKTVYLIGRII 487 (487) T ss_pred CCCEEEEEEECCCEEEEEEECC T ss_conf 4330127896231034455309

HHsearch alignment for GI: 255764472 and conserved domain: TIGR01578