HHsearch results for GI: 255764472 and protein with PDBid: 2yx0_A
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=98.25 E-value=4.7e-06 Score=63.29 Aligned_cols=172 Identities=14% Similarity=0.117 Sum_probs=99.1
Q ss_pred ECCCCCCCCCCCCHHHH--HH---HHHHHHHHHHHHHHHHHHHC--------------------CCCEEEEECCCCCEEE
Q ss_conf 12332446811100122--13---76410058899988763101--------------------3310587314541134
Q gi|255764472|r 182 IQEGCDKFCTFCVVPYT--RG---IEISRSLSQVVDEARKLIDN--------------------GVCEITLLGQNVNAWR 236 (469)
Q Consensus 182 I~~GC~~~CsfC~ip~~--RG---~~rSr~~~~Iv~ei~~l~~~--------------------G~kEi~L~g~d~~~Y~ 236 (469)
....||.+|.||--+.. .| +...-+++.|++++-..... +.+.+.++| +
T Consensus 77 sl~~CNlrCvfC~r~~~~~~~~~~~~~~d~pe~Ivee~i~~~~~~i~~~~g~~~~~~e~~~Ea~~~~hvais~------~ 150 (342)
T 2yx0_A 77 VLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISL------S 150 (342)
T ss_dssp CSSCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECS------S
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEC------C
T ss_conf 4152025898889987777776654444798999999999999988764267630256666524876799957------8
Q ss_pred ECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCC---CCC
Q ss_conf 11344431000216788620444300135442100010003665202211122013321114578998730333---441
Q gi|255764472|r 237 GKGLDGEKCTFSDLLYSLSEIKGLVRLRYTTSHPRDMSDCLIKAHGDLDVLMPYLHLPVQSGSDRILKSMNRRH---TAY 313 (469)
Q Consensus 237 g~~~~~~~~~l~~Ll~~l~~i~~~~riR~~s~~P~~~~~~li~~~~~~~~i~~~lhlpiQSgs~~vLk~M~R~~---~~e 313 (469)
|. +.-...|.+|++.+.+. |. .+.+. .|.. +.+++...... .....++.+++.+.+++..+++.|+- ..+
T Consensus 151 GE--Pll~p~l~eli~~~~~~-gi-~~~l~-TNGt-l~~~~~~l~~~-~~~~~~l~vSLDa~~~e~~~ki~r~~~~~~~e 223 (342)
T 2yx0_A 151 GE--PMLYPYMGDLVEEFHKR-GF-TTFIV-TNGT-IPERLEEMIKE-DKLPTQLYVSITAPDIETYNSVNIPMIPDGWE 223 (342)
T ss_dssp SC--GGGSTTHHHHHHHHHHT-TC-EEEEE-ECSC-CHHHHHHHHHT-TCCCSEEEEEECCSSHHHHHHHHCBSSSCHHH
T ss_pred CC--CCCCHHHHHHHHHHHHC-CC-EEEEE-CCCC-CHHHHHHHHHH-HCCCCEEEEECCCCCHHHHHHHHCCCCCCHHH
T ss_conf 77--53455599999999863-96-49996-5886-61179999987-47886799835789989999873766767799
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEE
Q ss_conf 14678999874013443200000135220124789886332210111002000011
Q gi|255764472|r 314 EYRQIIDRIRSVRPDIAISSDFIVGFPGETDDDFRATMDLVDKIGYAQAFSFKYSP 369 (469)
Q Consensus 314 ~~~~~i~~~r~~~p~~~i~tdiIvGfPgETeedf~~Tl~~i~~~~~~~~~vf~yS~ 369 (469)
.+++.++.+++.--...++++++-|+ ++++.++-.+|++...++.+.+-.|..
T Consensus 224 rvl~~L~~L~~~g~~~vir~tlv~g~---N~~ei~~~a~li~~~~pdfie~k~y~~ 276 (342)
T 2yx0_A 224 RILRFLELMRDLPTRTVVRLTLVKGE---NMHSPEKYAKLILKARPMFVEAKAYMF 276 (342)
T ss_dssp HHHHHHHHHTTCSSEEEEEEEECTTT---TCCCHHHHHHHHHHHCCSEEEEEECC-
T ss_pred HHHHHHHHHHHCCCCEEEEEEEECCC---CHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf 99999999996699889999996898---766699999999865999899960387