HHsearch alignment for GI: 255764473 and conserved domain: COG0078
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=659.95 Aligned_cols=302 Identities=52% Similarity=0.812 Sum_probs=284.7
Q ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 98887717844589999999999999999665236665443798799994288835789999898634754333321000
Q gi|255764473|r 2 MTYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEM 81 (306)
Q Consensus 2 m~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~s 81 (306)
T Consensus 3 ~~~~rhfL~l~D~t~~El~~ll~~A~~lK~~~~~~~~~~~-~gk~laliFeK~STRTR~SFe~a~~qlGg~~~~l~~~~~ 81 (310)
T COG0078 3 NLAGRHFLSLLDFTPEELEALLDLAAELKAAKKAGKELKL-KGKNLALIFEKTSTRTRVSFEVAATQLGGHAIYLGPGDS 81 (310)
T ss_pred CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 6643330405209999999999999999874515874256-896599996489840454499999976896487088755
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 01232107999997530010111210132006776301244124043332024678765576642001336773046104
Q gi|255764473|r 82 QLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGD 161 (306)
Q Consensus 82 s~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vGd 161 (306)
T Consensus 82 Qlgr~Esi~DTArVLsr~~D~I~~R~~~~~~v~~lA~~s~VPViNgLtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGD 161 (310)
T COG0078 82 QLGRGESIKDTARVLSRMVDAIMIRGFSHETLEELAKYSGVPVINGLTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGD 161 (310)
T ss_pred CCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf 26789967889999985502577853548999999972799667254566681899999999999638666857999767
Q ss_pred CCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHC----CCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHHH
Q ss_conf 555543101001233125765200001321000024320----1332221366466306873322210000002201333
Q gi|255764473|r 162 GNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARN----QGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKARE 237 (306)
Q Consensus 162 ~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~----~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~~ 237 (306)
T Consensus 162 gNNv~~Sl~~~~a~~G~dv~ia~P~~~~p~~~~~~~a~~~a~~sg~~i~~t~d~~eAv~gADvvyTDvWvSMGee~e~~~ 241 (310)
T COG0078 162 GNNVANSLLLAAAKLGMDVRIATPKGYEPDPEVVEKAKENAKESGGKITLTEDPEEAVKGADVVYTDVWVSMGEEAEAEE 241 (310)
T ss_pred CCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEECCCCCCCCHHHHHH
T ss_conf 63699999999998298689978986786989999999999853984898639889857899998367656762234078
Q ss_pred -H-HCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf -1-001112336889962898729925999874873576796799710686877559999999999625
Q gi|255764473|r 238 -E-HVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFG 304 (306)
Q Consensus 238 -~-~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG 304 (306)
T Consensus 242 ~~~~~~~~yQVn~~lm~~a~~~~ifmHCLPA~rG~EVTdeV~dg~~svvfdeAENRlH~qKAvl~~~l~ 310 (310)
T COG0078 242 RRIAFLPPYQVNEELMALAGPDAIFMHCLPAHRGEEVTDEVFEGPASVVFDEAENRLHTQKAVLAALLG 310 (310)
T ss_pred HHHHHCCCCEECHHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC
T ss_conf 888537785357999950379828974788777871579895787514730632108999999999639