HHsearch alignment for GI: 255764473 and conserved domain: PRK03515

>PRK03515 ornithine carbamoyltransferase subunit I; Provisional.
Probab=100.00  E-value=0  Score=663.66  Aligned_cols=302  Identities=39%  Similarity=0.633  Sum_probs=283.0

Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             88771784458999999999999999966523666544379879999428883578999989863475433332100001
Q gi|255764473|r    4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQL   83 (306)
Q Consensus         4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~   83 (306)
T Consensus         5 ~~k~~l~~~Dls~~ei~~il~~A~~lK~~~~~~~~~~~L~gk~i~~lF~epSTRTR~SFE~A~~~LGg~~i~l~~~~s~~   84 (334)
T PRK03515          5 YQKHFLKLLDFTPAELNALLQLAAKLKADKKSGKEEQKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQI   84 (334)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf             78884760119999999999999999867654887756799889999648870379999999998299299967753436


Q ss_pred             CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHC--CCCCCCCEEEECC
Q ss_conf             23210799999753001011121013200677630124412404333202467876557664200--1336773046104
Q gi|255764473|r   84 GRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHR--GSVKGKLFSWSGD  161 (306)
Q Consensus        84 ~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~--g~l~~~~i~~vGd  161 (306)
T Consensus        85 ~kgEsl~DTarvLs~~~D~Iv~R~~~~~~~~~~a~~s~vPVINg~~~~~HPtQaL~Dl~Ti~E~~~~~~l~~lkia~vGD  164 (334)
T PRK03515         85 GHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGD  164 (334)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECC
T ss_conf             68987899999999618879996755489999998769876648988878679999999999985689756648999578


Q ss_pred             C-CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHH----HHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHH
Q ss_conf             5-5554310100123312576520000132100002----4320133222136646630687332221000000220133
Q gi|255764473|r  162 G-NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLN----WARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAR  236 (306)
Q Consensus       162 ~-~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~----~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~  236 (306)
T Consensus       165 ~~nnv~~Sl~~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDviytd~w~smg~~~~~~  244 (334)
T PRK03515        165 ARNNMGNSLLEAAALTGLDLRLVAPKACWPEAALVTECQALAQKNGGNITLTEDIAEGVKGADFIYTDVWVSMGEPKEKW  244 (334)
T ss_pred             CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCEEEEEHHHHCCCHHHHH
T ss_conf             76545899999998549749997797568887899999999997199189960456551578788730213223246668


Q ss_pred             --HHHCCCCCCCCHHHHHCC-CCCCEEECCCCC------------------CCCCCCCHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             --310011123368899628-987299259998------------------74873576796799710686877559999
Q gi|255764473|r  237 --EEHVFQPFQVNLSLMSMA-HPDALFMHCLPA------------------HRGEEVINEVLDGPQSVVFDEAENRLHTQ  295 (306)
Q Consensus       237 --~~~~~~~y~i~~~~l~~a-~~~~~vmHplP~------------------~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr  295 (306)
T Consensus       245 ~er~~~~~~y~v~~~l~~~~~~~~~~~mHclPa~~~~~~~~~~~~~~~~p~~rG~EI~~~V~d~~~S~i~~QaeNrl~~~  324 (334)
T PRK03515        245 AERIALLRDYQVNSKMMQLTGNPQVKFLHCLPAFHDDQTTLGKKMAEEYGLHGGMEVTDEVFESAASIVFDQAENRLHTI  324 (334)
T ss_pred             HHHHHHHHCCEECHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHH
T ss_conf             98987612525249999622799908957888775211100022202478888618788885788646999987059999


Q ss_pred             HHHHHHHHCC
Q ss_conf             9999996255
Q gi|255764473|r  296 KAILLWCFGI  305 (306)
Q Consensus       296 ~AiL~~~lG~  305 (306)
T Consensus       325 ~AvL~~~L~k  334 (334)
T PRK03515        325 KAVMVATLSK  334 (334)
T ss_pred             HHHHHHHHCC
T ss_conf             9999998667