HHsearch alignment for GI: 255764473 and conserved domain: PRK03515
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional.
Probab=100.00 E-value=0 Score=663.66 Aligned_cols=302 Identities=39% Similarity=0.633 Sum_probs=283.0
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 88771784458999999999999999966523666544379879999428883578999989863475433332100001
Q gi|255764473|r 4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQL 83 (306)
Q Consensus 4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~ 83 (306)
T Consensus 5 ~~k~~l~~~Dls~~ei~~il~~A~~lK~~~~~~~~~~~L~gk~i~~lF~epSTRTR~SFE~A~~~LGg~~i~l~~~~s~~ 84 (334)
T PRK03515 5 YQKHFLKLLDFTPAELNALLQLAAKLKADKKSGKEEQKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQI 84 (334)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 78884760119999999999999999867654887756799889999648870379999999998299299967753436
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHC--CCCCCCCEEEECC
Q ss_conf 23210799999753001011121013200677630124412404333202467876557664200--1336773046104
Q gi|255764473|r 84 GRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHR--GSVKGKLFSWSGD 161 (306)
Q Consensus 84 ~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~--g~l~~~~i~~vGd 161 (306)
T Consensus 85 ~kgEsl~DTarvLs~~~D~Iv~R~~~~~~~~~~a~~s~vPVINg~~~~~HPtQaL~Dl~Ti~E~~~~~~l~~lkia~vGD 164 (334)
T PRK03515 85 GHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGD 164 (334)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECC
T ss_conf 68987899999999618879996755489999998769876648988878679999999999985689756648999578
Q ss_pred C-CCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHH----HHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCHHH
Q ss_conf 5-5554310100123312576520000132100002----4320133222136646630687332221000000220133
Q gi|255764473|r 162 G-NNILHSLIEGAARFNYLLNIATPIGSEPRNEYLN----WARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAR 236 (306)
Q Consensus 162 ~-~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~----~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~~~ 236 (306)
T Consensus 165 ~~nnv~~Sl~~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDviytd~w~smg~~~~~~ 244 (334)
T PRK03515 165 ARNNMGNSLLEAAALTGLDLRLVAPKACWPEAALVTECQALAQKNGGNITLTEDIAEGVKGADFIYTDVWVSMGEPKEKW 244 (334)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCEEEEEHHHHCCCHHHHH
T ss_conf 76545899999998549749997797568887899999999997199189960456551578788730213223246668
Q ss_pred --HHHCCCCCCCCHHHHHCC-CCCCEEECCCCC------------------CCCCCCCHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf --310011123368899628-987299259998------------------74873576796799710686877559999
Q gi|255764473|r 237 --EEHVFQPFQVNLSLMSMA-HPDALFMHCLPA------------------HRGEEVINEVLDGPQSVVFDEAENRLHTQ 295 (306)
Q Consensus 237 --~~~~~~~y~i~~~~l~~a-~~~~~vmHplP~------------------~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr 295 (306)
T Consensus 245 ~er~~~~~~y~v~~~l~~~~~~~~~~~mHclPa~~~~~~~~~~~~~~~~p~~rG~EI~~~V~d~~~S~i~~QaeNrl~~~ 324 (334)
T PRK03515 245 AERIALLRDYQVNSKMMQLTGNPQVKFLHCLPAFHDDQTTLGKKMAEEYGLHGGMEVTDEVFESAASIVFDQAENRLHTI 324 (334)
T ss_pred HHHHHHHHCCEECHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCEECHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 98987612525249999622799908957888775211100022202478888618788885788646999987059999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999996255
Q gi|255764473|r 296 KAILLWCFGI 305 (306)
Q Consensus 296 ~AiL~~~lG~ 305 (306)
T Consensus 325 ~AvL~~~L~k 334 (334)
T PRK03515 325 KAVMVATLSK 334 (334)
T ss_pred HHHHHHHHCC
T ss_conf 9999998667