HHsearch alignment for GI: 255764473 and conserved domain: TIGR03316
>TIGR03316 ygeW probable carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.
Probab=100.00 E-value=0 Score=638.44 Aligned_cols=299 Identities=28% Similarity=0.421 Sum_probs=266.8
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 88771784458999999999999999966523666544379879999428883578999989863475433332100001
Q gi|255764473|r 4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSEMQL 83 (306)
Q Consensus 4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ss~ 83 (306)
T Consensus 2 ~~kh~L~~~dls~~ei~~ll~~A~~lK~~~~~~~~~~~L~gk~~~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~ss~ 81 (357)
T TIGR03316 2 REKDFILTWEWTRDELDTVLDVAFDLKRLRALNISTKLFESGLGISLFRDNSTRTRFSFASAMNLLGLHAQDLDEGKSQI 81 (357)
T ss_pred CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 98882881128999999999999999877646887755789889999738984038999999998599599978322447
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEEECCC-----CHHHHHHCC-----------CCCCEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 232107999997530010111210132-----006776301-----------2441240433320246787655766420
Q gi|255764473|r 84 GRAETIGDTAKVLSRYVDAIVMRTTNH-----SRLLELTEY-----------ATVPVINALTDNTHPCQIIADIMTFEEH 147 (306)
Q Consensus 84 ~kgEsl~Dt~~~ls~~~D~iviR~~~~-----~~~~~~~~~-----------~~vpvINa~~~~~HPtQaL~D~~Ti~e~ 147 (306)
T Consensus 82 ~kGEsv~DTarvls~y~D~IviR~~~~~~~~~~~~~e~a~~~~~~~~~~~~~s~vPVINal~d~~HPtQaLaDl~Ti~e~ 161 (357)
T TIGR03316 82 GHGETVRETAEMISFFADGIGIRDDMYIGVGNAYMREVAKYVQEGYKDGVLEQRPPLVNLQCDIDHPTQAMADIMTLQEK 161 (357)
T ss_pred CCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 68988799999999638889998243334037889999987655443102236898783788877836999999999998
Q ss_pred CCCCC---CCCEEEEC-------CCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHH----CCCCCCCCCCCHHH
Q ss_conf 01336---77304610-------455554310100123312576520000132100002432----01332221366466
Q gi|255764473|r 148 RGSVK---GKLFSWSG-------DGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWAR----NQGASVALFHDAVQ 213 (306)
Q Consensus 148 ~g~l~---~~~i~~vG-------d~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~----~~g~~i~~~~d~~e 213 (306)
T Consensus 162 ~G~~~~l~g~~v~i~~~~~~~~g~~~~Va~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~e 241 (357)
T TIGR03316 162 FGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDE 241 (357)
T ss_pred HCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHH
T ss_conf 48722467774899986125565153799999999997598099977842367879999999999981992899759999
Q ss_pred HCCCCCCCCCCCEEECCCCC--------------------HHHHHHCCCCCCCCHHHHHCCCC-CCEEECCCCCC-----
Q ss_conf 30687332221000000220--------------------13331001112336889962898-72992599987-----
Q gi|255764473|r 214 AVKGAHCVFTDTWISMNQEF--------------------KAREEHVFQPFQVNLSLMSMAHP-DALFMHCLPAH----- 267 (306)
Q Consensus 214 al~~aD~V~~~~~~~~~~~~--------------------~~~~~~~~~~y~i~~~~l~~a~~-~~~vmHplP~~----- 267 (306)
T Consensus 242 av~~aDVvytd~W~sm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~~~m~~a~~~~ai~MHclPa~~RGv~ 321 (357)
T TIGR03316 242 AFKDADIVYPKSWAPIAAMEKRTELYTGSDTEGAELLEQELLSQNKKHKDWVCTEERMALTHDGEALYMHCLPADIRGVS 321 (357)
T ss_pred HHCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCC
T ss_conf 95689999836640137888899886011056788877766656775047511699997478979699799979877888
Q ss_pred -CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf -48735767967997106868775599999999996
Q gi|255764473|r 268 -RGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWC 302 (306)
Q Consensus 268 -rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~ 302 (306)
T Consensus 322 ~R~~EIt~eV~d~~~S~i~~QAeNrl~~~~AvLaat 357 (357)
T TIGR03316 322 CEEGEVTEEVFDGYRSVIYKEASNKPYTIAAMIAAT 357 (357)
T ss_pred CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 877714899967999709988750499999998529