HHsearch alignment for GI: 255764473 and conserved domain: pfam01488
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=91.56 E-value=0.19 Score=29.79 Aligned_cols=116 Identities=15% Similarity=0.091 Sum_probs=71.2
Q ss_pred HHHCCCCCCCCEEEECCCCCCCCCHHHCCCCCCE-EEEEECHHCCCCCCCCHHHHHCCC---CCCCCCCCHHHHCCCCCC
Q ss_conf 4200133677304610455554310100123312-576520000132100002432013---322213664663068733
Q gi|255764473|r 145 EEHRGSVKGKLFSWSGDGNNILHSLIEGAARFNY-LLNIATPIGSEPRNEYLNWARNQG---ASVALFHDAVQAVKGAHC 220 (306)
Q Consensus 145 ~e~~g~l~~~~i~~vGd~~~v~hS~i~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~g---~~i~~~~d~~eal~~aD~ 220 (306)
T Consensus 4 ~~~~~~l~~~~vlVIGa-G~~~~~~~~~L~~~g~~~i~v~nRt~----~ka~~la~~~~~~~~~~~~~~~l~~~l~~~Di 78 (134)
T pfam01488 4 KKIFGDLKGKKVLLIGA-GEMARLAAKHLLSKGAKKITIANRTL----EKAKELAEEFGGEEVEALPLDELEELLAEADI 78 (134)
T ss_pred HHHHCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCH----HHHHHHHHHCCCCCEEEEECHHHHHHHHHCCE
T ss_conf 77638814898999996-09999999999975998899954757----89999999849972589851354413631999
Q ss_pred CCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCC-CEEECCCCCCCCCCCCHHHHCCCCCH
Q ss_conf 2221000000220133310011123368899628987-29925999874873576796799710
Q gi|255764473|r 221 VFTDTWISMNQEFKAREEHVFQPFQVNLSLMSMAHPD-ALFMHCLPAHRGEEVINEVLDGPQSV 283 (306)
Q Consensus 221 V~~~~~~~~~~~~~~~~~~~~~~y~i~~~~l~~a~~~-~~vmHplP~~rg~EI~~~v~d~~~s~ 283 (306)
T Consensus 79 vI~aT--------~------s~~~ii~~~~~~~~~~~~~iiDLavP--rn--vd~~v~~l~~v~ 124 (134)
T pfam01488 79 VISAT--------S------APTPIITKEMVEEALKGLLFVDIAVP--RD--IEPEVGELEGVY 124 (134)
T ss_pred EEEEC--------C------CCCCEECHHHHHHCCCCEEEEEECCC--CC--CCHHHCCCCCEE
T ss_conf 99925--------9------99736489999744398599983478--88--665454569869