HHsearch results for GI: 255764473 and protein with PDBid: 1pvv_A

>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=100.00  E-value=0  Score=653.04  Aligned_cols=305  Identities=50%  Similarity=0.809  Sum_probs=286.7

Q ss_pred             CCC-CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             988-8771784458999999999999999966523666544379879999428883578999989863475433332100
Q gi|255764473|r    2 MTY-PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE   80 (306)
Q Consensus         2 m~~-~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~   80 (306)
                      |+. +||||+++||++++|..||++|..+|..++++...+.|+||+++++|||||||||+|||+|+++|||+++++++.+
T Consensus         3 ~~l~gk~ll~i~dls~~~i~~ll~~A~~lk~~~~~~~~~~~L~gk~v~llF~epSTRTR~SFe~A~~~LG~~vi~~~~~~   82 (315)
T 1pvv_A            3 VSLAGRDLLCLQDYTAEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHALYLNAQD   82 (315)
T ss_dssp             CCCTTCCBSCGGGSCHHHHHHHHHHHHHHHHHHHHTCCCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTSEEEEEEGGG
T ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             88889982751118999999999999999877645897633699989998448973058999999997699543204222


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf             00123210799999753001011121013200677630124412404333202467876557664200133677304610
Q gi|255764473|r   81 MQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSG  160 (306)
Q Consensus        81 ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vG  160 (306)
                      ||++||||++||++++++|+|+||+||++++.+.++++++++|||||+++++||||+|+|+|||+|++|.++|++|+|+|
T Consensus        83 ss~~kgEs~~Dt~~~ls~y~D~iviR~~~~~~~~~~a~~s~vPVINg~~~~~HPtQaL~Dl~Ti~e~~g~~~~l~i~~vG  162 (315)
T 1pvv_A           83 LQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVG  162 (315)
T ss_dssp             STTTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEES
T ss_pred             CCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf             34778860989999975258878886057106999998679988969998646778987678999872875687799967


Q ss_pred             CCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHH----CCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCH-H
Q ss_conf             455554310100123312576520000132100002432----01332221366466306873322210000002201-3
Q gi|255764473|r  161 DGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWAR----NQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFK-A  235 (306)
Q Consensus       161 d~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~----~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~-~  235 (306)
                      |++||+||++.++++||+++++++|+++.|++..+++++    ..|.++.+++|+.++++++|+||+++|.+++++.. .
T Consensus       163 d~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~~aDvvyt~~~~~~~~~~~~~  242 (315)
T 1pvv_A          163 DGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAE  242 (315)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSS
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEHHHHHCCCCCCHH
T ss_conf             87531568999999841878998898668868999999999987198599976999985579999541887646610259


Q ss_pred             HHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             33100111233688996289872992599987487357679679971068687755999999999962559
Q gi|255764473|r  236 REEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFGII  306 (306)
Q Consensus       236 ~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG~~  306 (306)
                      +...++.+||+|.++|+.++++++||||||+|||+||+++|+++|+|+||+||+||+|+|||||+++||-|
T Consensus       243 ~~~~~~~~~~l~~~~l~~~~~~~i~mHplP~~Rg~Ei~~~v~~~~~s~~~~Qa~Ngl~vrmAlL~~~lgg~  313 (315)
T 1pvv_A          243 ERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVMGGI  313 (315)
T ss_dssp             HHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99987763563399994489998998999987887008888669977699999701999999999997688