HHsearch results for GI: 255764473 and protein with PDBid: 1pvv_A
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=100.00 E-value=0 Score=653.04 Aligned_cols=305 Identities=50% Similarity=0.809 Sum_probs=286.7
Q ss_pred CCC-CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 988-8771784458999999999999999966523666544379879999428883578999989863475433332100
Q gi|255764473|r 2 MTY-PKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE 80 (306)
Q Consensus 2 m~~-~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~ 80 (306)
|+. +||||+++||++++|..||++|..+|..++++...+.|+||+++++|||||||||+|||+|+++|||+++++++.+
T Consensus 3 ~~l~gk~ll~i~dls~~~i~~ll~~A~~lk~~~~~~~~~~~L~gk~v~llF~epSTRTR~SFe~A~~~LG~~vi~~~~~~ 82 (315)
T 1pvv_A 3 VSLAGRDLLCLQDYTAEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHALYLNAQD 82 (315)
T ss_dssp CCCTTCCBSCGGGSCHHHHHHHHHHHHHHHHHHHHTCCCCTTTTCEEEEEESSCCSHHHHHHHHHHHHTTSEEEEEEGGG
T ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 88889982751118999999999999999877645897633699989998448973058999999997699543204222
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 00123210799999753001011121013200677630124412404333202467876557664200133677304610
Q gi|255764473|r 81 MQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSG 160 (306)
Q Consensus 81 ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vG 160 (306)
||++||||++||++++++|+|+||+||++++.+.++++++++|||||+++++||||+|+|+|||+|++|.++|++|+|+|
T Consensus 83 ss~~kgEs~~Dt~~~ls~y~D~iviR~~~~~~~~~~a~~s~vPVINg~~~~~HPtQaL~Dl~Ti~e~~g~~~~l~i~~vG 162 (315)
T 1pvv_A 83 LQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVG 162 (315)
T ss_dssp STTTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEES
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 34778860989999975258878886057106999998679988969998646778987678999872875687799967
Q ss_pred CCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHH----CCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCH-H
Q ss_conf 455554310100123312576520000132100002432----01332221366466306873322210000002201-3
Q gi|255764473|r 161 DGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWAR----NQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFK-A 235 (306)
Q Consensus 161 d~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~----~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~-~ 235 (306)
|++||+||++.++++||+++++++|+++.|++..+++++ ..|.++.+++|+.++++++|+||+++|.+++++.. .
T Consensus 163 d~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~~aDvvyt~~~~~~~~~~~~~ 242 (315)
T 1pvv_A 163 DGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAE 242 (315)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCCCSSTTSSSS
T ss_pred CCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEHHHHHCCCCCCHH
T ss_conf 87531568999999841878998898668868999999999987198599976999985579999541887646610259
Q ss_pred HHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 33100111233688996289872992599987487357679679971068687755999999999962559
Q gi|255764473|r 236 REEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFGII 306 (306)
Q Consensus 236 ~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG~~ 306 (306)
+...++.+||+|.++|+.++++++||||||+|||+||+++|+++|+|+||+||+||+|+|||||+++||-|
T Consensus 243 ~~~~~~~~~~l~~~~l~~~~~~~i~mHplP~~Rg~Ei~~~v~~~~~s~~~~Qa~Ngl~vrmAlL~~~lgg~ 313 (315)
T 1pvv_A 243 ERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVMGGI 313 (315)
T ss_dssp HHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99987763563399994489998998999987887008888669977699999701999999999997688