HHsearch results for GI: 255764473 and protein with PDBid: 2ef0_A

>2ef0_A Ornithine carbamoyltransferase; TTHA1199, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus HB8}
Probab=100.00  E-value=0  Score=628.59  Aligned_cols=295  Identities=43%  Similarity=0.725  Sum_probs=274.2

Q ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99888771784458999999999999999966523666544379879999428883578999989863475433332100
Q gi|255764473|r    1 MMTYPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSGSE   80 (306)
Q Consensus         1 ~m~~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~~~   80 (306)
                      .|+++||||+++||++++|+.||++|.++|+.+..   .++|+||+++++|+|||||||+|||+|+++|||++++++..+
T Consensus         5 ~~~m~k~ll~i~dls~~~i~~ll~~A~~lk~~~~~---~~~L~gk~v~llF~epSTRTR~SFe~A~~~LGg~~i~~~~~~   81 (301)
T 2ef0_A            5 ALTLPKDLLDFSGYGPKELQALLDLAEQLKRERYR---GEDLKGKVLALLFEKPSLRTRTTLEVAMVHLGGHAVYLDQKQ   81 (301)
T ss_dssp             --CCCSCBSSSTTCCHHHHHHHHHHHHHHHHHTCC---CCTTTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEGGG
T ss_pred             CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCC---CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             56877464862229999999999999998746335---775799889998547873069999999996799889756433


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf             00123210799999753001011121013200677630124412404333202467876557664200133677304610
Q gi|255764473|r   81 MQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSG  160 (306)
Q Consensus        81 ss~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g~l~~~~i~~vG  160 (306)
                      ||++||||++||+++++.|+|++|+||+.++.+.++++++++||||||++++||||+|+|+|||+|++|.++|++|+|+|
T Consensus        82 ss~~kgEs~~Dt~~~l~~~~d~iviR~~~~~~~~~~a~~s~vpVINa~~~~~HPtQaLlDl~Ti~e~~g~~~~l~i~~vG  161 (301)
T 2ef0_A           82 VGIGEREPVRDVAKNLERFVEGIAARVFRHETVEALARHAKVPVVNALSDRAHPLQALADLLTLKEVFGGLAGLEVAWVG  161 (301)
T ss_dssp             SCTTTCCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSCCTTCEEEEES
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf             34454451999999865126740079834000999998678987838887525989998899999986875687059863


Q ss_pred             CCCCCCCCHHHCCCCCCEEEEEECHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCH-HHHHH
Q ss_conf             45555431010012331257652000013210000243201332221366466306873322210000002201-33310
Q gi|255764473|r  161 DGNNILHSLIEGAARFNYLLNIATPIGSEPRNEYLNWARNQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFK-AREEH  239 (306)
Q Consensus       161 d~~~v~hS~i~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~i~~~~d~~eal~~aD~V~~~~~~~~~~~~~-~~~~~  239 (306)
                      |++||.||++.++..+|+.+.+++|.++.+++......     ....++|+++++.++|+||+|+|++++.+.+ ....+
T Consensus       162 d~~~v~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~-----~~~~~~d~~e~~~~ad~v~~d~~~~~~~~~e~~~~~~  236 (301)
T 2ef0_A          162 DGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRA-----NAFFTHDPKEAALGAHALYTDVWTSMGQEAEREKRLR  236 (301)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHH-----TCEEESCHHHHHTTCSEEEECCCC--------CHHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHC-----CCCEECCHHHHHCCCCEEEEEEHHHCCCHHHHHHHHH
T ss_conf             76752678999999739955760587677898998642-----6730046888645887789751544323677899999


Q ss_pred             CCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             0111233688996289872992599987487357679679971068687755999999999962
Q gi|255764473|r  240 VFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCF  303 (306)
Q Consensus       240 ~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~l  303 (306)
                      ++.+||||.++|+++++|++||||||+|||+||+++|+++|+|+||+||+||+|+|||||+++|
T Consensus       237 ~~~~y~l~~~~l~~~~~~~i~mHplP~~rg~Ei~~~v~~~~~s~~~~Qa~Ngl~vrmAlL~~lL  300 (301)
T 2ef0_A          237 DFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEEAVHGPRSRVFDQAENRLHTAKAVLLTLL  300 (301)
T ss_dssp             HTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHHHHHSTTBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8875646399996089896997999998897678778469856899999843999999999986