HHsearch results for GI: 255764473 and protein with PDBid: 3grf_A

>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=100.00  E-value=0  Score=627.46  Aligned_cols=300  Identities=36%  Similarity=0.597  Sum_probs=271.8

Q ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC-CCCC
Q ss_conf             887717844589999999999999999665236665443798799994288835789999898634754333321-0000
Q gi|255764473|r    4 YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFEVAMKHLGGDTIFLSG-SEMQ   82 (306)
Q Consensus         4 ~~k~~l~~~dl~~~~i~~ll~~A~~~k~~~~~~~~~~~l~gk~i~~lF~e~StRTR~SFe~A~~~LG~~~~~~~~-~~ss   82 (306)
                      .+||||+++||++++|..||++|.++|+.+.+.  ...|+||+++++|+|||||||+|||+|+++|||+++++++ .+|+
T Consensus         6 ~~khll~i~dls~~ei~~ll~~A~~~k~~~~~~--~~~l~~k~v~~lF~epSTRTR~SFe~A~~~LGg~~i~l~~~~~s~   83 (328)
T 3grf_A            6 QTRHLLTISALCPKELAYLIDRALDMKKNPAKY--TARAANKTLLAFFAKPSLRTRVSLETAMTRLGGHAIYYELGANSN   83 (328)
T ss_dssp             CSCCBSSGGGSCHHHHHHHHHHHHHHHHCGGGG--TTTTTTCEEEEEESSCCHHHHHHHHHHHHHHTCEEEEEEC-----
T ss_pred             CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCC--CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf             788715143199999999999999987374445--655689889999657873169999999998599478667320123


Q ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCC-------CCCCCC
Q ss_conf             1232107999997530010111210132006776301244124043332024678765576642001-------336773
Q gi|255764473|r   83 LGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVPVINALTDNTHPCQIIADIMTFEEHRG-------SVKGKL  155 (306)
Q Consensus        83 ~~kgEsl~Dt~~~ls~~~D~iviR~~~~~~~~~~~~~~~vpvINa~~~~~HPtQaL~D~~Ti~e~~g-------~l~~~~  155 (306)
                      ++||||++||++++++|+|++|+||++++.+.++++++++||||||++++||||+|+|+|||+|++|       .+++++
T Consensus        84 ~~kgEs~~Dt~~~ls~~~d~ivvR~~~~~~~~~~a~~~~vpVINa~~~~~HPtQaL~Dl~Ti~e~~g~~~~~~~~~~~l~  163 (328)
T 3grf_A           84 VGGKETVQDTAEVFSRMVDICTARLATKEMMREMAQHASVPCINALDDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIK  163 (328)
T ss_dssp             -----CHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEESSCSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCC
T ss_pred             CCCCEEHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
T ss_conf             67862199999987334653456525033566777507862354776566826999999999998465333467513624


Q ss_pred             EEEECCC-CCCCCCHHHCCCCCCEEEEEECHHCCCCC--CCCHHHHH------CCCCCCCCCCCHHHHCCCCCCCCCCCE
Q ss_conf             0461045-55543101001233125765200001321--00002432------013322213664663068733222100
Q gi|255764473|r  156 FSWSGDG-NNILHSLIEGAARFNYLLNIATPIGSEPR--NEYLNWAR------NQGASVALFHDAVQAVKGAHCVFTDTW  226 (306)
Q Consensus       156 i~~vGd~-~~v~hS~i~~~~~~g~~v~~~~P~~~~~~--~~~~~~~~------~~g~~i~~~~d~~eal~~aD~V~~~~~  226 (306)
                      ++|+||. +||+||++.++.++|+++.+++|+++.+.  +.....++      ..|.++++++|++++++++|+||+++|
T Consensus       164 i~~~gd~~~~v~~S~~~~~~~~g~~v~i~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~ea~~~aDvvy~~~~  243 (328)
T 3grf_A          164 FAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSW  243 (328)
T ss_dssp             EEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCC
T ss_pred             EEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCEEEEEHH
T ss_conf             76327776542679999999779969996365335576699999999998763259839999679999617998985011


Q ss_pred             EECCCCC--HHHHHHCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             0000220--13331001112336889962898729925999874873576796799710686877559999999999625
Q gi|255764473|r  227 ISMNQEF--KAREEHVFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAILLWCFG  304 (306)
Q Consensus       227 ~~~~~~~--~~~~~~~~~~y~i~~~~l~~a~~~~~vmHplP~~rg~EI~~~v~d~~~s~~~~Qa~Ngl~vr~AiL~~~lG  304 (306)
                      ++++...  .....+++.+||||.++|++++++++||||||+|||+||+++|+|+|+|+||+||+||+|+|||||+|+|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~a~~~~i~MHplP~~Rg~EI~~~V~d~~~s~i~~Qa~Ngl~vrmAlL~~lL~  323 (328)
T 3grf_A          244 MSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCLPATRGEEQTASVIDGPKSVCYDEAGNRLHSAMAVLDFFLH  323 (328)
T ss_dssp             C--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCTTTTBCHHHHTSTTBCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             20333055579999876424643999963699998989989998880188885798756999997209999999999984


Q ss_pred             C
Q ss_conf             5
Q gi|255764473|r  305 I  305 (306)
Q Consensus       305 ~  305 (306)
                      -
T Consensus       324 ~  324 (328)
T 3grf_A          324 D  324 (328)
T ss_dssp             C
T ss_pred             H
T ss_conf             1