RPSBLAST alignment of GI: 255764473 and protein with PDBid: 3gd5

>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis; 2.10A {Gloeobacter violaceus pcc 7421} Length = 323

 Score =  251 bits (642), Expect = 1e-67
 Identities = 131/306 (42%), Positives = 188/306 (61%), Gaps = 9/306 (2%)

Query: 4   YPKHFADLSNISSSNLSCIIEVAKKIKNSSENIFENKPLSGKVLAMIFEKPSTRTRVSFE 63
           +      L ++  + L  ++ +A ++K           L GKVL ++F K STRTRVSF 
Sbjct: 12  FRPDLLSLDDLDEAQLHALLTLAHQLKRGERV----ANLHGKVLGLVFLKASTRTRVSFT 67

Query: 64  VAMKHLGGDTIFLSGSEMQLGRAETIGDTAKVLSRYVDAIVMRTTNHSRLLELTEYATVP 123
           VAM  LGG  I LS S  Q+GR E + DTA+VL RYVD + +RT   + L E   YA +P
Sbjct: 68  VAMYQLGGQVIDLSPSNTQVGRGEPVRDTARVLGRYVDGLAIRTFAQTELEEYAHYAGIP 127

Query: 124 VINALTDNTHPCQIIADIMTFEEHRGSVKGKLFSWSGDGNNILHSLIEGAARFNYLLNIA 183
           VINALTD+ HPCQ++AD++T  E+ G + G   ++ GDGNN+ HSL+ G A+    + +A
Sbjct: 128 VINALTDHEHPCQVVADLLTIRENFGRLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVA 187

Query: 184 TPIGSEPRNEYLNWAR----NQGASVALFHDAVQAVKGAHCVFTDTWISMNQEFKAREEH 239
           TP G  P       A       GA V +  D  +A +GAH ++TD W SM QE + +   
Sbjct: 188 TPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRL 247

Query: 240 -VFQPFQVNLSLMSMAHPDALFMHCLPAHRGEEVINEVLDGPQSVVFDEAENRLHTQKAI 298
            +F+ +Q+N +L++ A  +A+ +HCLPAHRGEE+ +EV++GP+S ++DEAENRLH QKA+
Sbjct: 248 QLFEQYQINAALLNCAAAEAIVLHCLPAHRGEEITDEVMEGPRSRIWDEAENRLHAQKAV 307

Query: 299 LLWCFG 304
           L    G
Sbjct: 308 LAALMG 313