HHsearch alignment for GI: 255764474 and conserved domain: PRK00025
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed.
Probab=99.17 E-value=1.5e-08 Score=76.75 Aligned_cols=309 Identities=13% Similarity=0.160 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHCCEEEEEECCCC-------------CCCCCCCHHH-----------HHHHHHHHHHCCCEEEEECCCH
Q ss_conf 888999999971985999805886-------------6562347899-----------8998875432597089962854
Q gi|255764474|r 23 TVFGLCPIQRKLGQRLVVFGYCLP-------------KNIPSIGISS-----------LLTCWKKPIGQNSRIWHARRNN 78 (352)
Q Consensus 23 ~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~-----------~~~~~~~~~~~~~~ivh~~~~~ 78 (352)
T Consensus 16 ~ga~li~~Lk~~~~~~~~~GiGG~~M~~~G~~~l~d~~~l~vmG~~evl~~~~~~~~~~~~~~~~i~~~~Pd~vi~ID~p 95 (382)
T PRK00025 16 LGAGLIRALKAQAPNLEFVGIGGPRMEAAGFESLFDMEELAVMGLVEVLPRLPRLLKIRKELKRLLLAEPPDVFILIDAP 95 (382)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 99999999983198967999882999976995447757831301999997799999999999999986499999997783
Q ss_pred H--HHHHHHHHHHHCCCEEEEECCHHHH--HHHHHHHHHHHHCCEEEECCHHHHHHCCC---CEEEECCCCCHHHHCCCC
Q ss_conf 6--8999999997099819997574562--01134798996266899889899974368---839974882777823784
Q gi|255764474|r 79 E--MLLGVMMRDVLRMPLKLVFTSPSQR--NHSRWTRYLISRMDEVITTSQKSARFIER---PSTVIMHGVDTERFRPTS 151 (352)
Q Consensus 79 ~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~d~ii~~s~~~~~~~~~---~~~vi~~gid~~~~~~~~ 151 (352)
T Consensus 96 gFnlrlak~lkk~-~~~ipvi~yv~PqvWAWr~~R~k~~~~~~D~ll~ifPFE~~~f~~~g~~~~fVGHPl-~d~~~~~~ 173 (382)
T PRK00025 96 DFNLRLAKKLKKA-LPGIPIIHYVSPSVWAWRPGRAKKIAKATDHVLAILPFEAAFYDKLGVPVTYVGHPL-ADEIPLEP 173 (382)
T ss_pred HHHHHHHHHHHHH-CCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEECCCCH-HHHCCCCC
T ss_conf 0659999999971-699988999471565406418999999998761087656899986599813569815-64322356
Q ss_pred CHHHHHHHCCCCCCCCEEEEE-E-EECHH-HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 326878872889887279995-1-22644-51236665456530047740588631333210001466776443112332
Q gi|255764474|r 152 NKQEARRHLKISEDAKLIGCF-G-RIRKL-KGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKK 228 (352)
Q Consensus 152 ~~~~~~~~~~~~~~~~~i~~~-G-~~~~~-Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~i~~~~l~~ 228 (352)
T Consensus 174 ~~~~~~~~~~~~~~~~~i~lLPGSR~~EI~~~lPi~l~a~~~l~~~~p~~~fvip~~~~~----~~~~i~~~~~~~~~~~ 249 (382)
T PRK00025 174 DRAAARAELGLDPDARVLALLPGSRGSEIKRLLPTFLEAAQLLQQRYPDLRFVVPLANPK----RREQFEQLLAEYAPDL 249 (382)
T ss_pred CHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHH----HHHHHHHHHHHCCCCC
T ss_conf 879999873998556617870588589999978999999999998789939999558877----8999999998479998
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCHHCCCCCCCE----------------
Q ss_conf 212222223310000000000012333222222100000100111-027884101002348842----------------
Q gi|255764474|r 229 RILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVV-ASNTGVFSELLDPENAKA---------------- 291 (352)
Q Consensus 229 ~V~~~g~~~~~~~~~~~adi~i~pS~~Eg~gl~~lEAma~G~PvI-~s~~~~~~e~i~~~~g~~---------------- 291 (352)
T Consensus 250 ~i~~--~~~~~~~~l~~sd~ai~~S-----GTaTLE~al~~~P~Vv~Yk~~~lt~~i~k~lvkv~~isL~Nii~~k~ivP 322 (382)
T PRK00025 250 SVTL--LDGQAREAMAAADAALAAS-----GTVTLEAALLGVPMVVGYKVKPLTFWIAKRLVKVPYISLPNLLAGEELVP 322 (382)
T ss_pred CEEE--ECCCCHHHHHHCCEEEECC-----CHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEHHHHHCCCCCCH
T ss_conf 3898--2684177887388876537-----77999999971985899807899999999965699765248754997661
Q ss_pred EEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHH
Q ss_conf 4996599989999999999869899999999999999982998---99999999999
Q gi|255764474|r 292 GVIVPPRNLHALEKAVLYFMNSKKIMSDTGNRGRERAVKHFSI---VKEASDIGKVY 345 (352)
Q Consensus 292 G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~---~~~a~~~~~iY 345 (352)
T Consensus 323 EllQ~~~~~~~i~~~~~~ll~d~~~~~~~~~~~~~l-r~~L~~gas~raA~~Il~~l 378 (382)
T PRK00025 323 ELLQEEATPEKLARALLELLADGARRQALLEGFTEL-HQYLRCGAAERAAQAVLELL 378 (382)
T ss_pred HHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHH
T ss_conf 340566999999999999966999999999999999-99857899999999999999