HHsearch alignment for GI: 255764474 and conserved domain: cd03819
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=0 Score=365.83 Aligned_cols=322 Identities=23% Similarity=0.285 Sum_probs=264.5
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCC------------CCC------CCHHHHHHHHHHHHHCCCE
Q ss_conf 7078787877077888899999997198599980588665------------623------4789989988754325970
Q gi|255764474|r 9 IAPNMKFRHTGVTSTVFGLCPIQRKLGQRLVVFGYCLPKN------------IPS------IGISSLLTCWKKPIGQNSR 70 (352)
Q Consensus 9 i~~~~~~~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~~~~~------------~~~------~~~~~~~~~~~~~~~~~~~ 70 (352)
T Consensus 3 ii~sl~~--GGaE~~~~~La~~L~~~Gh~V~vi~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D 80 (355)
T cd03819 3 VLPALES--GGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIKLPFISKNPLRILLNVARLRRLIREEKVD 80 (355)
T ss_pred ECCCCCC--CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 7899999--41799999999999987998999968998715566349669991787788289999999999999996998
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHC-------CCCEEEECCCCC
Q ss_conf 8996285468999999997099819997574562011347989962668998898999743-------688399748827
Q gi|255764474|r 71 IWHARRNNEMLLGVMMRDVLRMPLKLVFTSPSQRNHSRWTRYLISRMDEVITTSQKSARFI-------ERPSTVIMHGVD 143 (352)
Q Consensus 71 ivh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ii~~s~~~~~~~-------~~~~~vi~~gid 143 (352)
T Consensus 81 ivh~h~~~~~~~~~~a~~~~~~~~i~t~H~--~~~~~~~~~~~~~~~~~~i~~S~~~~~~~~~~~~~~~~ki~vI~ngid 158 (355)
T cd03819 81 IVHARSRAPAWSAYLAARRTRPPFVTTVHG--FYSVNFRYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVD 158 (355)
T ss_pred EEEECCCCHHHHHHHHHHHCCCCEEEEECC--CCCHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCHHHEEEECCCCC
T ss_conf 999778644999999998539978999678--774067999999727989994589999999973998789999788756
Q ss_pred HHHHCCCCC----HHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHH
Q ss_conf 778237843----2687887288988727999512264451236665456530047740588631333210001466776
Q gi|255764474|r 144 TERFRPTSN----KQEARRHLKISEDAKLIGCFGRIRKLKGTDLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQR 219 (352)
Q Consensus 144 ~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~ 219 (352)
T Consensus 159 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGRl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~-~~~~~~~~~ 237 (355)
T cd03819 159 LDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR-RFYYAELLE 237 (355)
T ss_pred HHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCC-HHHHHHHHH
T ss_conf 5423877787788999998628999987999961665445769999999999864899799997078641-689999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC-CCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCC
Q ss_conf 443112332212222223310000000000012333-2222221000001001110278841010023488424996599
Q gi|255764474|r 220 RIYANGLKKRILFIDEQSSIEDWYRALNIFVAPPLY-EGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPR 298 (352)
Q Consensus 220 ~i~~~~l~~~V~~~g~~~~~~~~~~~adi~i~pS~~-Eg~gl~~lEAma~G~PvI~s~~~~~~e~i~~~~g~~G~~~~~~ 298 (352)
T Consensus 238 ~~~~~~l~~~v~f~G~~~d~~~~~~~adi~v~pS~~~Egf~~vllEAma~G~PvV~s~~gg~~eii~--~~~~G~l~~~~ 315 (355)
T cd03819 238 LIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVR--PGETGLLVPPG 315 (355)
T ss_pred HHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHCC--CCCCEEEECCC
T ss_conf 9998199762886576214689987403255887771000078999998699899908999476615--89978998899
Q ss_pred CHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 98999999999986-9899999999999999982998999
Q gi|255764474|r 299 NLHALEKAVLYFMN-SKKIMSDTGNRGRERAVKHFSIVKE 337 (352)
Q Consensus 299 d~~~la~~i~~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~ 337 (352)
T Consensus 316 d~~~l~~~i~~~l~~~~~~r~~~~~~ar~~~~~~fs~~~m 355 (355)
T cd03819 316 DAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHC
T ss_conf 9999999999998699999999999999999984898339