HHsearch alignment for GI: 255764474 and conserved domain: cd04299
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.49 E-value=1.6e-06 Score=63.04 Aligned_cols=183 Identities=13% Similarity=0.139 Sum_probs=131.3
Q ss_pred CCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCC--CC--CEEEEEECCCCCCCCCHHH---HHHHHHHHCCCCCCCCCC
Q ss_conf 8898872799951226445123666545653004--77--4058863133321000146---677644311233221222
Q gi|255764474|r 161 KISEDAKLIGCFGRIRKLKGTDLFVDCMINILPH--HP--GWTAVVVGKTTLKHYLFKK---NLQRRIYANGLKKRILFI 233 (352)
Q Consensus 161 ~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~--~~--~~~l~i~G~g~~~~~~~~~---~l~~~i~~~~l~~~V~~~ 233 (352)
T Consensus 473 ~ldp~~LTIGFARRfAtYKRa~Llf~D~eRL~~il~~~~rPVQiIfAGKAHP~D~~Gk~lI~~i~~~s~~~~~~~rivFL 552 (778)
T cd04299 473 VLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFL 552 (778)
T ss_pred CCCCCCCEEEEHHHCCCCCCHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 26865213411220566676022208999999986399976599993788998766799999999986380557758996
Q ss_pred CCCC-CCC-CCCHHHHHHCCCCC--CCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCCCEEEEECCCC----------
Q ss_conf 2223-310-00000000001233--322222210000010011102788410100234884249965999----------
Q gi|255764474|r 234 DEQS-SIE-DWYRALNIFVAPPL--YEGFGLTPLEAMASGIPVVASNTGVFSELLDPENAKAGVIVPPRN---------- 299 (352)
Q Consensus 234 g~~~-~~~-~~~~~adi~i~pS~--~Eg~gl~~lEAma~G~PvI~s~~~~~~e~i~~~~g~~G~~~~~~d---------- 299 (352)
T Consensus 553 edYDm~lAr~Lv~GvDVWLNnP~rPlEASGTSGMKAa~NGvlNlSvlDGWW~Eg---y~g~nGWaIg~~~~~~d~~~qD~ 629 (778)
T cd04299 553 EDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEG---YDGENGWAIGDGDEYEDDEYQDA 629 (778)
T ss_pred CCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEC---CCCCCCEECCCCCCCCCHHHCCH
T ss_conf 798869998750664351379999743676320313334873333047767503---15988624798877788455039
Q ss_pred --HHHHHHHHHHH----H-C-C----HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf --89999999999----8-6-9----899999999999999982998999999999999
Q gi|255764474|r 300 --LHALEKAVLYF----M-N-S----KKIMSDTGNRGRERAVKHFSIVKEASDIGKVYD 346 (352)
Q Consensus 300 --~~~la~~i~~l----~-~-~----~~~~~~~~~~a~~~~~~~fs~~~~a~~~~~iY~ 346 (352)
T Consensus 630 ~da~~LY~lLE~eViP~yY~r~~~g~p~~Wv~~mk~si~~~~p~F~t~RMv~eY~~~~Y 688 (778)
T cd04299 630 EEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred HHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99999999988511113112799999889999999999973675574468999999982