HHsearch alignment for GI: 255764474 and conserved domain: pfam04464
>pfam04464 Glyphos_transf CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.
Probab=97.21 E-value=0.0039 Score=40.25 Aligned_cols=147 Identities=16% Similarity=0.236 Sum_probs=85.5
Q ss_pred HHHCCCCCCCCEEEEEEEECHHHHH-------HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 8872889887279995122644512-------366654565300477405886313332100014667764431123322
Q gi|255764474|r 157 RRHLKISEDAKLIGCFGRIRKLKGT-------DLFVDCMINILPHHPGWTAVVVGKTTLKHYLFKKNLQRRIYANGLKKR 229 (352)
Q Consensus 157 ~~~~~~~~~~~~i~~~G~~~~~Kg~-------~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~i~~~~l~~~ 229 (352)
T Consensus 2 k~~lgl~~~kkvILYaPT~R~~~~~~~~~~~~~~~~~~l~~~l~--~n~~liik~Hp~---------~~~~~~~~~~~~~ 70 (186)
T pfam04464 2 REELGIPKDKKVILYAPTFRDDGYYSAGSILFNLDLEKLLEKLG--ENYVILVKLHPL---------VSNSIINKRYDSD 70 (186)
T ss_pred HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHC--CCEEEEEEECHH---------HHCCHHHHCCCCC
T ss_conf 26419999897999869733886655444323013999998727--683999972667---------6400022025776
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCC-------CCCEEEEECCCCHHH
Q ss_conf 1222222331000000000001233322222210000010011102788410100234-------884249965999899
Q gi|255764474|r 230 ILFIDEQSSIEDWYRALNIFVAPPLYEGFGLTPLEAMASGIPVVASNTGVFSELLDPE-------NAKAGVIVPPRNLHA 302 (352)
Q Consensus 230 V~~~g~~~~~~~~~~~adi~i~pS~~Eg~gl~~lEAma~G~PvI~s~~~~~~e~i~~~-------~g~~G~~~~~~d~~~ 302 (352)
T Consensus 71 ~~~~~~~~di~~ll~~aDiLIT-----DYSSi~fD~lll~kPii~~-~~D~~~Y~~~rg~~~d~~~~~~g~~v--~~~~e 142 (186)
T pfam04464 71 VIDVSDYSDIQDLFLASDILIT-----DYSSVFFDFALLDKPIIFY-APDLEEYRELRGFYFDYEKEAPGPVV--KTFEE 142 (186)
T ss_pred EEECCCCCCHHHHHHHHCEEEE-----EHHHHHHHHHHHCCCEEEE-ECCHHHHHHCCCCCCCHHHCCCCCEE--CCHHH
T ss_conf 7978898589999998436776-----4688999999879978998-18789997525861058780787625--98999
Q ss_pred HHHHHHHHHCCHHHHHHHHH
Q ss_conf 99999999869899999999
Q gi|255764474|r 303 LEKAVLYFMNSKKIMSDTGN 322 (352)
Q Consensus 303 la~~i~~l~~~~~~~~~~~~ 322 (352)
T Consensus 143 L~~~i~~~~~~~~~~~~~~~ 162 (186)
T pfam04464 143 LLDALKNYMENDEEYAEKRR 162 (186)
T ss_pred HHHHHHHHHHCCHHHHHHHH
T ss_conf 99999998757767799999