RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|255764475|ref|YP_003084341.1| hypothetical protein CLIBASIA_03592 [Candidatus Liberibacter asiaticus str. psy62] (59 letters) >2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} (A:550-614) Length = 65 Score = 23.9 bits (51), Expect = 7.3 Identities = 3/6 (50%), Positives = 5/6 (83%) Query: 19 NVQISI 24 NV++ I Sbjct: 1 NVEVKI 6 >2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} (B:550-611) Length = 62 Score = 23.6 bits (50), Expect = 8.9 Identities = 3/6 (50%), Positives = 5/6 (83%) Query: 19 NVQISI 24 NV++ I Sbjct: 1 NVEVKI 6 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.332 0.146 0.447 Gapped Lambda K H 0.267 0.0511 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 440,169 Number of extensions: 13626 Number of successful extensions: 26 Number of sequences better than 10.0: 1 Number of HSP's gapped: 26 Number of HSP's successfully gapped: 2 Length of query: 59 Length of database: 4,956,049 Length adjustment: 28 Effective length of query: 31 Effective length of database: 4,009,509 Effective search space: 124294779 Effective search space used: 124294779 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (22.0 bits) S2: 50 (23.6 bits)