RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|255764475|ref|YP_003084341.1| hypothetical protein CLIBASIA_03592 [Candidatus Liberibacter asiaticus str. psy62] (59 letters) >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 2006 Score = 24.5 bits (53), Expect = 5.4 Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 18/48 (37%) Query: 6 PAIVPNTAILQENNVQISIPFPMPIVAMPAIILWLIITLLRGY---CR 50 P+ P+ L +SIP P++ +I L Y + Sbjct: 222 PSNTPDKDYL------LSIPISCPLIG--------VIQLAH-YVVTAK 254 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.332 0.146 0.447 Gapped Lambda K H 0.267 0.0582 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 504,780 Number of extensions: 16344 Number of successful extensions: 29 Number of sequences better than 10.0: 1 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 1 Length of query: 59 Length of database: 5,693,230 Length adjustment: 30 Effective length of query: 29 Effective length of database: 4,965,910 Effective search space: 144011390 Effective search space used: 144011390 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (22.0 bits) S2: 50 (23.4 bits)