RPS-BLAST 2.2.22 [Sep-27-2009]

Database: pdb70 
           24,244 sequences; 5,693,230 total letters

Searching..................................................done

Query= gi|255764475|ref|YP_003084341.1| hypothetical protein
CLIBASIA_03592 [Candidatus Liberibacter asiaticus str. psy62]
         (59 letters)



>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
           acyl-carrier-protein, beta-ketoacyl reductase,
           beta-ketoacyl synthase, dehydratase; 4.00A
           {Saccharomyces cerevisiae}
          Length = 2006

 Score = 24.5 bits (53), Expect = 5.4
 Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 18/48 (37%)

Query: 6   PAIVPNTAILQENNVQISIPFPMPIVAMPAIILWLIITLLRGY---CR 50
           P+  P+   L      +SIP   P++         +I L   Y    +
Sbjct: 222 PSNTPDKDYL------LSIPISCPLIG--------VIQLAH-YVVTAK 254


  Database: pdb70
    Posted date:  Jan 26, 2011 11:21 AM
  Number of letters in database: 5,693,230
  Number of sequences in database:  24,244
  
Lambda     K      H
   0.332    0.146    0.447 

Gapped
Lambda     K      H
   0.267   0.0582    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24244
Number of Hits to DB: 504,780
Number of extensions: 16344
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 59
Length of database: 5,693,230
Length adjustment: 30
Effective length of query: 29
Effective length of database: 4,965,910
Effective search space: 144011390
Effective search space used: 144011390
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 50 (23.4 bits)