HHsearch alignment for GI: 255764476 and conserved domain: COG0642
>COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=100.00 E-value=2.9e-35 Score=259.35 Aligned_cols=216 Identities=35% Similarity=0.581 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCEEEEEC
Q ss_conf 9999999966663225899999999973577788998999999999999999999999999998851498-300023306
Q gi|255764476|r 568 IKNSFVQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGI-MKLNYSTIV 646 (792)
Q Consensus 568 lk~~F~~~vSHELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~-~~l~~~~vd 646 (792)
T Consensus 114 ~~~~~~~~~~hel~~pl~~~~~~~~~~~~~---~~~~-~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (336)
T COG0642 114 AKREFLANISHELRTPLTAIRGLLELLLEG---LLDP-QRELLEIIEEEAERLLRLVNDLLDLSRLEAGTKLKLLLELVD 189 (336)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHCC---CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 999999999888589799999999997414---6525-999999999999999999999999997644574422346455
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEEC
Q ss_conf 99999999999999998489689999569860899878999999999988677538886889999998799899999978
Q gi|255764476|r 647 LNDLLNEVKQSIATKMHENNIRIKVISDGKLGSFVADRQRLLQIFSKILSNAMDFSSKGSTVILKAARDNGDFIFSVKNN 726 (792)
Q Consensus 647 l~~~i~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~D~~rL~QVl~NLl~NAik~~~~gg~I~i~~~~~~~~v~i~V~D~ 726 (792)
T Consensus 190 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~l~~vl~nLi~NAi~~~~-~~~i~i~~~~~~~~i~i~V~D~ 267 (336)
T COG0642 190 LAELLEEVVRLLAPLAQEKGIELAVDLP-ELPYVLGDPERLRQVLVNLLSNAIKYTP-GGEITISVRQDDEQVTISVEDT 267 (336)
T ss_pred HHHHHHHHHHHHHHHHHHCCEEEEEECC-CCEEEEECHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCEEEEEEECC
T ss_conf 9999999999999876634848998237-6607860788999999999998998668-9859999996387799999807
Q ss_pred CCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf 89789778654148837626898888566379999999996198699997889943999997347
Q gi|255764476|r 727 GSSIPEDMCKSVFNRFVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSK 791 (792)
Q Consensus 727 G~GI~~e~~~riF~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~ 791 (792)
T Consensus 268 G~Gi~~~~~~~if~~~~~~~~~~~--g~GlGL~i~~~~~~~~~g~i~~~~~~~~Gt~~~i~lP~~ 330 (336)
T COG0642 268 GPGIPEEELERIFEPFFRTDKSRS--GTGLGLAIVKRIVELHGGTISVESEPGKGTTFTIRLPLA 330 (336)
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEECC
T ss_conf 899798899988188634799989--886329999999998799899950799977999998477