HHsearch alignment for GI: 255764476 and conserved domain: COG2972

>COG2972 Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].
Probab=99.60  E-value=3e-12  Score=101.76  Aligned_cols=185  Identities=22%  Similarity=0.277  Sum_probs=118.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHH
Q ss_conf             99966663225899999999973577788998999999999999999999999999998851498300023306999999
Q gi|255764476|r  573 VQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYSTIVLNDLLN  652 (792)
Q Consensus       573 ~~~vSHELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~~vdl~~~i~  652 (792)
T Consensus       263 sqi~pHfL~NtL~~I~~~~~~~~----------~~~~~~~v~~l~~ll----R--~~l~~~~------~~--~~l~~E~~  318 (456)
T COG2972         263 SQINPHFLYNTLETIRMLAEEDD----------PEEAAKVVKALSKLL----R--YSLSNLD------NI--VTLEIELL  318 (456)
T ss_pred             HCCCCHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHH----H--HHHHCCC------CC--CCHHHHHH
T ss_conf             21261689999999999987357----------999999999999999----9--7500655------53--41999999


Q ss_pred             HHHHHHHHHHHHCCCEEEEEECCCCCEE-EECHHHHHHHHHHHHHHHHHCC----CCCCEEEEEEEEECCEEEEEEEECC
Q ss_conf             9999999999848968999956986089-9878999999999988677538----8868899999987998999999788
Q gi|255764476|r  653 EVKQSIATKMHENNIRIKVISDGKLGSF-VADRQRLLQIFSKILSNAMDFS----SKGSTVILKAARDNGDFIFSVKNNG  727 (792)
Q Consensus       653 ~~~~~~~~~~~~~~i~l~~~~~~~~~~v-~~D~~rL~QVl~NLl~NAik~~----~~gg~I~i~~~~~~~~v~i~V~D~G  727 (792)
T Consensus       319 ~~~kyl~iq~~r~~~~le~~~~i~~~~~~l~~p~---l~lqpLvENAi~hgi~~~~~~~~I~i~~~~~~~~i~i~i~Dng  395 (456)
T COG2972         319 LIEKYLEIQKLRIGDRLEVPLPIDEELEPLIDPK---LVLQPLVENAIEHGIEPKRPGGSIAISAKKQDDVIQISISDNG  395 (456)
T ss_pred             HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHH---HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf             9999999998199879999720375332023278---8988879999998620469995799999405879999977699


Q ss_pred             CCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCE--EEEEEECCCCEEEEEEEECCC
Q ss_conf             97897786541488376268988885663799999999961986--999978899439999973479
Q gi|255764476|r  728 SSIPEDMCKSVFNRFVSNAHRGQRRGVGLGLSIVESFINLHGGH--VSISSSDEGVTTINCRIPSKE  792 (792)
Q Consensus       728 ~GI~~e~~~riF~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~--I~v~S~~G~Gttf~v~lP~~e  792 (792)
T Consensus       396 ~g~~~~~~~~~~~~-------~~~r-~giGL~Nv~~rl~~~~g~~~~~i~s~~~~gt~v~~~~~~~~  454 (456)
T COG2972         396 PGIDEEKLEGLSTK-------GENR-SGIGLSNVKERLKLYFGEPGLSIDSQPGKGTFVQIIIPKRE  454 (456)
T ss_pred             CCCCHHHHHHHHHC-------CCCC-CCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEHHC
T ss_conf             99587888667641-------5777-77358879999987189762179996489589999986301