HHsearch alignment for GI: 255764476 and conserved domain: COG3290
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].
Probab=100.00 E-value=6.6e-32 Score=236.39 Aligned_cols=310 Identities=17% Similarity=0.267 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCEEEEECHHHHHHHCCCHH--HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
Q ss_conf 999999999962034328996898488640588878289878--943898388988777630256114688998740265
Q gi|255764476|r 431 TLVKVQGETIDHLSEGVAVFGPDGRIKLSNPAFRSLWKTEEN--RLSPGTHIRNIAATCSRYYNESDGWDLFAAIITSFD 508 (792)
Q Consensus 431 ~l~~~q~~~ld~l~e~vav~~~dgr~~~~N~a~~~l~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 508 (792)
T Consensus 212 ~l~~er~A~l~si~EGviAvd~~G~It~~N~~A~~ll~~~~~~~~~ig~~i-~~v~---~p~~~l~----~v-------l 276 (537)
T COG3290 212 TLLEERQAMLQSIKEGVIAVDKKGVITLINQAAQKLLGLRQPSGDPIGRSI-VEVL---PPDSDLP----EV-------L 276 (537)
T ss_pred HHHHHHHHHHHHHHCEEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCC-EEEE---CCCCCCH----HH-------H
T ss_conf 999999999987636289987898576112889998465676756446610-3761---5636757----78-------7
Q ss_pred CCCCEEEEEEEECCEEEEEEEEEECCCC----CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4431156899972503888999970588----766312320689999888899999999999999999999666632258
Q gi|255764476|r 509 DERKSLQGTLELLSDSVLEYSIIPLPNA----QTMLTFVNVTDSVRAERALTEKNEALRKADEIKNSFVQHVSYELRSPL 584 (792)
Q Consensus 509 ~~r~~~~~~~~~~dG~~~~~~~~pl~dg----~~l~~~~DIT~~k~~E~aL~e~~eale~a~~lk~~F~~~vSHELrtPL 584 (792)
T Consensus 277 ~~~~~~~~~e~~~ng~~~i~nr~pI~~~~~~~GaI~tFRdktei~~L~eqLt~vr~ya--------~aLRaq~HEfmNkL 348 (537)
T COG3290 277 ETGKPQHDEEIRINGRLLVANRVPIRSGGQIVGAIITFRDKTEIKKLTEQLTGVRQYA--------EALRAQSHEFMNKL 348 (537)
T ss_pred HCCCCCCCHHHHCCCEEEEEEECCEEECCEEEEEEEEEECHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHH
T ss_conf 5077631134414775999985237888977689998763778999999999899999--------99988528888889
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999973577788998999999999999999999999999998851498300023306999999999999999984
Q gi|255764476|r 585 TNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYSTIVLNDLLNEVKQSIATKMHE 664 (792)
Q Consensus 585 t~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~~vdl~~~i~~~~~~~~~~~~~ 664 (792)
T Consensus 349 htI~GLlql~~--y-----d~a~~~I~~~~---~~qq~~~~~l~--~~---------i~----~~~lAg~LlgK~~rArE 403 (537)
T COG3290 349 HTILGLLQLGE--Y-----DDALDYIQQES---EEQQELIDSLS--EK---------IK----DPVLAGFLLGKISRARE 403 (537)
T ss_pred HHHHHHHHHCC--H-----HHHHHHHHHHH---HHHHHHHHHHH--HH---------CC----CHHHHHHHHHHHHHHHH
T ss_conf 99987885053--7-----89999999987---64045689999--85---------12----08889998868999997
Q ss_pred CCCEEEEEECCCCCE--EEECHHHHHHHHHHHHHHHHHCCC---CCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHC
Q ss_conf 896899995698608--998789999999999886775388---868899999987998999999788978977865414
Q gi|255764476|r 665 NNIRIKVISDGKLGS--FVADRQRLLQIFSKILSNAMDFSS---KGSTVILKAARDNGDFIFSVKNNGSSIPEDMCKSVF 739 (792)
Q Consensus 665 ~~i~l~~~~~~~~~~--v~~D~~rL~QVl~NLl~NAik~~~---~gg~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~riF 739 (792)
T Consensus 404 lgv~l~Id~~S~l~~~p~~~~~~~litIlGNLidNA~eA~~~~~~~k~I~l~i~~~~~~lvieV~D~G~GI~~~~~~~iF 483 (537)
T COG3290 404 LGVSLIIDPNSQLPQLPSELQPHDLVTILGNLIDNALEALLAPEENKEIELSLSDRGDELVIEVADTGPGIPPEVRDKIF 483 (537)
T ss_pred CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHH
T ss_conf 29659975798678898766767899999998877888851557896799999836987999995799998968877787
Q ss_pred CCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf 8837626898888566379999999996198699997889943999997347
Q gi|255764476|r 740 NRFVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSK 791 (792)
Q Consensus 740 ~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~ 791 (792)
T Consensus 484 e~G~Stk~~---~~rGiGL~Lvkq~V~~~~G~I~~~s~~~~Gt~F~i~iP~~ 532 (537)
T COG3290 484 EKGVSTKNT---GGRGIGLYLVKQLVERLGGSIEVESEKGQGTRFSIYIPKV 532 (537)
T ss_pred HCCCCCCCC---CCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 348414677---8876128899999987496699950789814999988887