HHsearch alignment for GI: 255764476 and conserved domain: COG3290
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].
Probab=95.56 E-value=0.17 Score=28.13 Aligned_cols=117 Identities=16% Similarity=0.079 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCCCCHHHHHCCCC-CCCCH-HHHHHHHHHCCCCCEEEE
Q ss_conf 9999999999998516800589815992898525789873677877566101585-33896-789999861257870345
Q gi|255764476|r 187 KLSNHISVFKVLFDSLDFLVWHRDQAGDILWANISYKKNTETEGIVFQKAIGESR-KLFKE-EIKKRMISSSALEKNFCE 264 (792)
Q Consensus 187 ~L~~~~~~lr~llda~P~~vw~~D~dGri~~vN~A~~~~~e~~~~~~~~~i~~~~-~ll~~-~~~~~~~~~~~~~~~~~~ 264 (792)
T Consensus 209 EIa~l~~er~A~l~si~EGviAvd~~G~It~~N~~A~~ll~~~~~~-~~~ig~~i~~v~~p~~~l~~v---l~~~~~~~~ 284 (537)
T COG3290 209 EIATLLEERQAMLQSIKEGVIAVDKKGVITLINQAAQKLLGLRQPS-GDPIGRSIVEVLPPDSDLPEV---LETGKPQHD 284 (537)
T ss_pred HHHHHHHHHHHHHHHHHCEEEEECCCCEEEEHHHHHHHHHCCCCCC-CCCCCCCCEEEECCCCCCHHH---HHCCCCCCC
T ss_conf 9999999999999876362899878985761128899984656767-564466103761563675778---750776311
Q ss_pred EEEEEECCEEEEEEEEEEEC--C---CCEEEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 78886569078999997632--8---9529998304589998878899999
Q gi|255764476|r 265 TVSTLEHGNNKSYKIVRVLN--S---FGEAGIAIDVSKEITVNDQLTHTYE 310 (792)
Q Consensus 265 ~~~~~~~G~rr~~~v~~~~~--~---~G~~Gia~DITErk~ae~aLrr~~e 310 (792)
T Consensus 285 ~e-~~~ng--~~~i~nr~pI~~~~~~~GaI~tFRdktei~~L~eqLt~vr~ 332 (537)
T COG3290 285 EE-IRING--RLLVANRVPIRSGGQIVGAIITFRDKTEIKKLTEQLTGVRQ 332 (537)
T ss_pred HH-HHCCC--EEEEEEECCEEECCEEEEEEEEEECHHHHHHHHHHHHHHHH
T ss_conf 34-41477--59999852378889776899987637789999999998999