HHsearch alignment for GI: 255764476 and conserved domain: COG4251
>COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].
Probab=100.00 E-value=2.8e-45 Score=327.70 Aligned_cols=233 Identities=21% Similarity=0.422 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999999996666322589999999997357778899899999999999999999999999999885
Q gi|255764476|r 554 ALTEKNEALRKADEIKNSFVQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATV 633 (792)
Q Consensus 554 aL~e~~eale~a~~lk~~F~~~vSHELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i 633 (792)
T Consensus 509 ela~l~r~lersn~el~~f~yv~sHdlqePl~~I~~~a~lL~~~~~~~~d~~~~~~i~~~~~~~~~~~~lidd~l~~s~l 588 (750)
T COG4251 509 ELAQLRRELERSNAELRAFAYVASHDLQEPLRQISNYAQLLSERYSDALDEEAKEFITFISRLTSLMQQLIDDLLTYSKL 588 (750)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99989988765158999999986104667999999999766634366657588999999999999999999977423120
Q ss_pred HCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCC-CEEEEEE
Q ss_conf 149830002330699999999999999998489689999569860899878999999999988677538886-8899999
Q gi|255764476|r 634 DAGIMKLNYSTIVLNDLLNEVKQSIATKMHENNIRIKVISDGKLGSFVADRQRLLQIFSKILSNAMDFSSKG-STVILKA 712 (792)
Q Consensus 634 ~aG~~~l~~~~vdl~~~i~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~D~~rL~QVl~NLl~NAik~~~~g-g~I~i~~ 712 (792)
T Consensus 589 ~--~~~~~l~~td~~~vv~~vl~~l~~ri~dtgaei~i--~~-lp~v~~d~~~l~qv~~NLi~Naik~~~~e~~~i~I~~ 663 (750)
T COG4251 589 G--LTEAPLQPTDVQKVVDKVLLELSQRIADTGAEIRI--AP-LPVVAADATQLGQVFQNLIANAIKFGGPENPDIEISA 663 (750)
T ss_pred C--CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEE--CC-CCEEECCHHHHHHHHHHHHHHHEECCCCCCCCEEEEE
T ss_conf 5--54577777526789999997345311256524786--25-6446408889999999987655210788898158853
Q ss_pred EEECCEEEEEEEECCCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf 9879989999997889789778654148837626898888566379999999996198699997889943999997347
Q gi|255764476|r 713 ARDNGDFIFSVKNNGSSIPEDMCKSVFNRFVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSK 791 (792)
Q Consensus 713 ~~~~~~v~i~V~D~G~GI~~e~~~riF~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~ 791 (792)
T Consensus 664 ~r~ed~~t~sV~dng~Gi~~a~~~riF~iFqRl~s~~~y~gtG~GL~I~kkI~e~H~G~i~vEs~~gEgsTF~f~lp~~ 742 (750)
T COG4251 664 ERQEDEWTFSVRDNGIGIDPAYFERIFVIFQRLHSRDEYLGTGLGLAICKKIAERHQGRIWVESTPGEGSTFYFTLPVG 742 (750)
T ss_pred ECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECC
T ss_conf 3258730798547877769899988899887037565514777338999999998484588860478741689984058