HHsearch alignment for GI: 255764476 and conserved domain: COG5002

>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=100.00  E-value=0  Score=391.10  Aligned_cols=349  Identities=21%  Similarity=0.332  Sum_probs=269.9

Q ss_pred             EEEECCHHHHHHHHHHHHH-HHHHHHHHHHHCCCCEEEECCCCEEEEECHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHC
Q ss_conf             9994595799999999999-999999999620343289968984886405888782898789438983889887776302
Q gi|255764476|r  413 IWMFENLTVQVDLETKYNT-LVKVQGETIDHLSEGVAVFGPDGRIKLSNPAFRSLWKTEENRLSPGTHIRNIAATCSRYY  491 (792)
Q Consensus       413 ~~~~~DITE~~~le~~~~~-l~~~q~~~ld~l~e~vav~~~dgr~~~~N~a~~~l~g~~~~~l~~~~~~~~~~~~~~~~~  491 (792)
T Consensus        89 a~~fn~Lt~~~~~aq~n~e~Er~kL~SvlayMtDGViATdRrG~iI~iN~~A~k~L~~~~E~~~~~~i~elL~------i  162 (459)
T COG5002          89 ADSFNDLTKRVQEAQANTEQERRKLDSVLAYMTDGVIATDRRGKIILINKPALKMLGVSKEDALGRSILELLK------I  162 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCHHHHHHCCCHHHHHCCCHHHHHC------C
T ss_conf             9999789999999987678888889989998707657645778689935079998486778771653788857------7


Q ss_pred             CCCHHHHHHHHHHHCCCCCCCEEEEEEEECC---EEE--EEEEEEECCCC---CEEEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             5611468899874026544311568999725---038--88999970588---766312320689999888899999999
Q gi|255764476|r  492 NESDGWDLFAAIITSFDDERKSLQGTLELLS---DSV--LEYSIIPLPNA---QTMLTFVNVTDSVRAERALTEKNEALR  563 (792)
Q Consensus       492 ~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~d---G~~--~~~~~~pl~dg---~~l~~~~DIT~~k~~E~aL~e~~eale  563 (792)
T Consensus       163 ~d~y---~~~dL~e~~----~s~--lld~~~~~E~~~lrv~Fs~i~rEsGfisGlIaVlhDvTEqek~e~ErR-------  226 (459)
T COG5002         163 EDTY---TFEDLVEKN----DSL--LLDSSDEEEGYVLRVNFSVIQRESGFISGLIAVLHDVTEQEKVERERR-------  226 (459)
T ss_pred             CCCE---EHHHHHHCC----CCE--EEEECCCCCCEEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHH-------
T ss_conf             5430---288887259----828--986047886379999888885114664406998731438788899999-------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             99999999999966663225899999999973577788998999999999999999999999999998851498300023
Q gi|255764476|r  564 KADEIKNSFVQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYS  643 (792)
Q Consensus       564 ~a~~lk~~F~~~vSHELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~  643 (792)
T Consensus       227 -------efvanvSHElRTPltsmksyLEALe~ga~~d~-eiAp~Fl~vt~~ETeRMiRlV~DLl~lsr~d~~~~qln~e  298 (459)
T COG5002         227 -------EFVANVSHELRTPLTSMKSYLEALEEGAWEDK-EIAPRFLRVTLNETERMIRLVNDLLQLSRMDNARYQLNKE  298 (459)
T ss_pred             -------HHHHHCCHHHCCCHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             -------99886140314736789999999746874471-2326899874788999999999998772576325666578


Q ss_pred             EECHHHHHHHHHHHHHHHHHHCCCE-EEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEE
Q ss_conf             3069999999999999999848968-999956986089987899999999998867753888688999999879989999
Q gi|255764476|r  644 TIVLNDLLNEVKQSIATKMHENNIR-IKVISDGKLGSFVADRQRLLQIFSKILSNAMDFSSKGSTVILKAARDNGDFIFS  722 (792)
Q Consensus       644 ~vdl~~~i~~~~~~~~~~~~~~~i~-l~~~~~~~~~~v~~D~~rL~QVl~NLl~NAik~~~~gg~I~i~~~~~~~~v~i~  722 (792)
T Consensus       299 ~inft~fl~~ii~R~e~~~~~e~~~~~vR~~p~~~~~veiD~DK~tQVldNii~NA~KYsP~Gg~Itv~~~~~~~~v~iS  378 (459)
T COG5002         299 WINFTAFLNEIINRFEMILKKETIARFVRDIPKQDIWVEIDPDKMTQVLDNIISNALKYSPDGGRITVSVKQRETWVEIS  378 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEE
T ss_conf             88748899999999999875677889996088886489967068999999998777524899973999996307589999


Q ss_pred             EEECCCCCCHHHHHHHCCCCEECCCC--CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf             99788978977865414883762689--8888566379999999996198699997889943999997347
Q gi|255764476|r  723 VKNNGSSIPEDMCKSVFNRFVSNAHR--GQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSK  791 (792)
Q Consensus       723 V~D~G~GI~~e~~~riF~~F~~~~~~--~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~  791 (792)
T Consensus       379 I~D~G~gIPk~d~~~iFdrfyRvdkARsR~~gGTGLGLaIakeiV~~hgG~iWA~s~~gkgtt~~ftLPy~  449 (459)
T COG5002         379 ISDQGLGIPKEDLEKIFDRFYRVDKARSRKMGGTGLGLAIAKEIVQAHGGRIWAESEEGKGTTFSFTLPYS  449 (459)
T ss_pred             ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCC
T ss_conf             74688899840689999988522366540378776129999999997098577760458861799995466