HHsearch alignment for GI: 255764476 and conserved domain: COG5002
>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=100.00 E-value=0 Score=391.10 Aligned_cols=349 Identities=21% Similarity=0.332 Sum_probs=269.9
Q ss_pred EEEECCHHHHHHHHHHHHH-HHHHHHHHHHHCCCCEEEECCCCEEEEECHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 9994595799999999999-999999999620343289968984886405888782898789438983889887776302
Q gi|255764476|r 413 IWMFENLTVQVDLETKYNT-LVKVQGETIDHLSEGVAVFGPDGRIKLSNPAFRSLWKTEENRLSPGTHIRNIAATCSRYY 491 (792)
Q Consensus 413 ~~~~~DITE~~~le~~~~~-l~~~q~~~ld~l~e~vav~~~dgr~~~~N~a~~~l~g~~~~~l~~~~~~~~~~~~~~~~~ 491 (792)
T Consensus 89 a~~fn~Lt~~~~~aq~n~e~Er~kL~SvlayMtDGViATdRrG~iI~iN~~A~k~L~~~~E~~~~~~i~elL~------i 162 (459)
T COG5002 89 ADSFNDLTKRVQEAQANTEQERRKLDSVLAYMTDGVIATDRRGKIILINKPALKMLGVSKEDALGRSILELLK------I 162 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCHHHHHHCCCHHHHHCCCHHHHHC------C
T ss_conf 9999789999999987678888889989998707657645778689935079998486778771653788857------7
Q ss_pred CCCHHHHHHHHHHHCCCCCCCEEEEEEEECC---EEE--EEEEEEECCCC---CEEEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 5611468899874026544311568999725---038--88999970588---766312320689999888899999999
Q gi|255764476|r 492 NESDGWDLFAAIITSFDDERKSLQGTLELLS---DSV--LEYSIIPLPNA---QTMLTFVNVTDSVRAERALTEKNEALR 563 (792)
Q Consensus 492 ~~~~~~~~~~~~i~~~~~~r~~~~~~~~~~d---G~~--~~~~~~pl~dg---~~l~~~~DIT~~k~~E~aL~e~~eale 563 (792)
T Consensus 163 ~d~y---~~~dL~e~~----~s~--lld~~~~~E~~~lrv~Fs~i~rEsGfisGlIaVlhDvTEqek~e~ErR------- 226 (459)
T COG5002 163 EDTY---TFEDLVEKN----DSL--LLDSSDEEEGYVLRVNFSVIQRESGFISGLIAVLHDVTEQEKVERERR------- 226 (459)
T ss_pred CCCE---EHHHHHHCC----CCE--EEEECCCCCCEEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHH-------
T ss_conf 5430---288887259----828--986047886379999888885114664406998731438788899999-------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 99999999999966663225899999999973577788998999999999999999999999999998851498300023
Q gi|255764476|r 564 KADEIKNSFVQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYS 643 (792)
Q Consensus 564 ~a~~lk~~F~~~vSHELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~ 643 (792)
T Consensus 227 -------efvanvSHElRTPltsmksyLEALe~ga~~d~-eiAp~Fl~vt~~ETeRMiRlV~DLl~lsr~d~~~~qln~e 298 (459)
T COG5002 227 -------EFVANVSHELRTPLTSMKSYLEALEEGAWEDK-EIAPRFLRVTLNETERMIRLVNDLLQLSRMDNARYQLNKE 298 (459)
T ss_pred -------HHHHHCCHHHCCCHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf -------99886140314736789999999746874471-2326899874788999999999998772576325666578
Q ss_pred EECHHHHHHHHHHHHHHHHHHCCCE-EEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEE
Q ss_conf 3069999999999999999848968-999956986089987899999999998867753888688999999879989999
Q gi|255764476|r 644 TIVLNDLLNEVKQSIATKMHENNIR-IKVISDGKLGSFVADRQRLLQIFSKILSNAMDFSSKGSTVILKAARDNGDFIFS 722 (792)
Q Consensus 644 ~vdl~~~i~~~~~~~~~~~~~~~i~-l~~~~~~~~~~v~~D~~rL~QVl~NLl~NAik~~~~gg~I~i~~~~~~~~v~i~ 722 (792)
T Consensus 299 ~inft~fl~~ii~R~e~~~~~e~~~~~vR~~p~~~~~veiD~DK~tQVldNii~NA~KYsP~Gg~Itv~~~~~~~~v~iS 378 (459)
T COG5002 299 WINFTAFLNEIINRFEMILKKETIARFVRDIPKQDIWVEIDPDKMTQVLDNIISNALKYSPDGGRITVSVKQRETWVEIS 378 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEE
T ss_conf 88748899999999999875677889996088886489967068999999998777524899973999996307589999
Q ss_pred EEECCCCCCHHHHHHHCCCCEECCCC--CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf 99788978977865414883762689--8888566379999999996198699997889943999997347
Q gi|255764476|r 723 VKNNGSSIPEDMCKSVFNRFVSNAHR--GQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSK 791 (792)
Q Consensus 723 V~D~G~GI~~e~~~riF~~F~~~~~~--~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~ 791 (792)
T Consensus 379 I~D~G~gIPk~d~~~iFdrfyRvdkARsR~~gGTGLGLaIakeiV~~hgG~iWA~s~~gkgtt~~ftLPy~ 449 (459)
T COG5002 379 ISDQGLGIPKEDLEKIFDRFYRVDKARSRKMGGTGLGLAIAKEIVQAHGGRIWAESEEGKGTTFSFTLPYS 449 (459)
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCC
T ss_conf 74688899840689999988522366540378776129999999997098577760458861799995466