HHsearch alignment for GI: 255764476 and conserved domain: COG5002
>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=97.69 E-value=0.0014 Score=42.42 Aligned_cols=126 Identities=14% Similarity=0.072 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCCCCHHHHHCCCC-CCCCHHHHHHHHHHCCCC
Q ss_conf 9999999999999999998516800589815992898525789873677877566101585-338967899998612578
Q gi|255764476|r 181 TTLKCKKLSNHISVFKVLFDSLDFLVWHRDQAGDILWANISYKKNTETEGIVFQKAIGESR-KLFKEEIKKRMISSSALE 259 (792)
Q Consensus 181 l~~~~~~L~~~~~~lr~llda~P~~vw~~D~dGri~~vN~A~~~~~e~~~~~~~~~i~~~~-~ll~~~~~~~~~~~~~~~ 259 (792)
T Consensus 99 ~~~aq~n~e~Er~kL~SvlayMtDGViATdRrG~iI~iN~~A~k~L---~~~~E~~~~~~i~elL~i~d~y~~~dL~e~~ 175 (459)
T COG5002 99 VQEAQANTEQERRKLDSVLAYMTDGVIATDRRGKIILINKPALKML---GVSKEDALGRSILELLKIEDTYTFEDLVEKN 175 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCHHHHHH---CCCHHHHHCCCHHHHHCCCCCEEHHHHHHCC
T ss_conf 9999876788888899899987076576457786899350799984---8677877165378885775430288887259
Q ss_pred CEEEEEEEEEECCEEEEEEE------EEEECCCCEEEEEEEHHHHHHHHHHHHHHHHH
Q ss_conf 70345788865690789999------97632895299983045899988788999999
Q gi|255764476|r 260 KNFCETVSTLEHGNNKSYKI------VRVLNSFGEAGIAIDVSKEITVNDQLTHTYEI 311 (792)
Q Consensus 260 ~~~~~~~~~~~~G~rr~~~v------~~~~~~~G~~Gia~DITErk~ae~aLrr~~e~ 311 (792)
T Consensus 176 ~s~lld~~--~~~E~~~lrv~Fs~i~rEsGfisGlIaVlhDvTEqek~e~ErRefvan 231 (459)
T COG5002 176 DSLLLDSS--DEEEGYVLRVNFSVIQRESGFISGLIAVLHDVTEQEKVERERREFVAN 231 (459)
T ss_pred CCEEEEEC--CCCCCEEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 82898604--788637999988888511466440699873143878889999999886