HHsearch alignment for GI: 255764476 and conserved domain: COG5002

>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=97.69  E-value=0.0014  Score=42.42  Aligned_cols=126  Identities=14%  Similarity=0.072  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCCCCHHHHHCCCC-CCCCHHHHHHHHHHCCCC
Q ss_conf             9999999999999999998516800589815992898525789873677877566101585-338967899998612578
Q gi|255764476|r  181 TTLKCKKLSNHISVFKVLFDSLDFLVWHRDQAGDILWANISYKKNTETEGIVFQKAIGESR-KLFKEEIKKRMISSSALE  259 (792)
Q Consensus       181 l~~~~~~L~~~~~~lr~llda~P~~vw~~D~dGri~~vN~A~~~~~e~~~~~~~~~i~~~~-~ll~~~~~~~~~~~~~~~  259 (792)
T Consensus        99 ~~~aq~n~e~Er~kL~SvlayMtDGViATdRrG~iI~iN~~A~k~L---~~~~E~~~~~~i~elL~i~d~y~~~dL~e~~  175 (459)
T COG5002          99 VQEAQANTEQERRKLDSVLAYMTDGVIATDRRGKIILINKPALKML---GVSKEDALGRSILELLKIEDTYTFEDLVEKN  175 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCHHHHHH---CCCHHHHHCCCHHHHHCCCCCEEHHHHHHCC
T ss_conf             9999876788888899899987076576457786899350799984---8677877165378885775430288887259


Q ss_pred             CEEEEEEEEEECCEEEEEEE------EEEECCCCEEEEEEEHHHHHHHHHHHHHHHHH
Q ss_conf             70345788865690789999------97632895299983045899988788999999
Q gi|255764476|r  260 KNFCETVSTLEHGNNKSYKI------VRVLNSFGEAGIAIDVSKEITVNDQLTHTYEI  311 (792)
Q Consensus       260 ~~~~~~~~~~~~G~rr~~~v------~~~~~~~G~~Gia~DITErk~ae~aLrr~~e~  311 (792)
T Consensus       176 ~s~lld~~--~~~E~~~lrv~Fs~i~rEsGfisGlIaVlhDvTEqek~e~ErRefvan  231 (459)
T COG5002         176 DSLLLDSS--DEEEGYVLRVNFSVIQRESGFISGLIAVLHDVTEQEKVERERREFVAN  231 (459)
T ss_pred             CCEEEEEC--CCCCCEEEEEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf             82898604--788637999988888511466440699873143878889999999886