HHsearch alignment for GI: 255764476 and conserved domain: PRK10547
>PRK10547 chemotaxis protein CheA; Provisional.
Probab=99.86 E-value=3.5e-19 Score=149.29 Aligned_cols=162 Identities=19% Similarity=0.381 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHH--CCCEEEEEECCCCCEEEECHHH---HHHHH
Q ss_conf 999999999999998851498300023306999999999999999984--8968999956986089987899---99999
Q gi|255764476|r 617 STILLNLVNDILDLATVDAGIMKLNYSTIVLNDLLNEVKQSIATKMHE--NNIRIKVISDGKLGSFVADRQR---LLQIF 691 (792)
Q Consensus 617 ~~~l~~li~diLdls~i~aG~~~l~~~~vdl~~~i~~~~~~~~~~~~~--~~i~l~~~~~~~~~~v~~D~~r---L~QVl 691 (792)
T Consensus 315 ~~~l~r~~~dLq~------~vm~~RM--vP~~~lf~r~~R~VRdlar~~gK~V~L~i~--G~--dtelDr~Ile~L~dPL 382 (662)
T PRK10547 315 MGQLQRNARDLQE------SVMSIRM--MPMEYVFSRFPRLVRDLAGKLGKQVELTLV--GS--STELDKSLIERIIDPL 382 (662)
T ss_pred HHHHHHHHHHHHH------HHHHHCC--EEHHHHHHHHHHHHHHHHHHHCCEEEEEEE--CC--CEEEHHHHHHHHHHHH
T ss_conf 9999999999999------9998625--218998888789999999986982599996--68--6777199999888799
Q ss_pred HHHHHHHHHCC------------CCCCEEEEEEEEECCEEEEEEEECCCCCCHHHH---------------------HHH
Q ss_conf 99988677538------------886889999998799899999978897897786---------------------541
Q gi|255764476|r 692 SKILSNAMDFS------------SKGSTVILKAARDNGDFIFSVKNNGSSIPEDMC---------------------KSV 738 (792)
Q Consensus 692 ~NLl~NAik~~------------~~gg~I~i~~~~~~~~v~i~V~D~G~GI~~e~~---------------------~ri 738 (792)
T Consensus 383 ~HLlRNAvDHGIE~peeR~a~GKp~~G~I~l~a~~~g~~v~I~v~DDGrGiD~e~Ir~kAv~kGL~~~e~lsd~e~~~LI 462 (662)
T PRK10547 383 THLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLAVSENMSDDEVGMLI 462 (662)
T ss_pred HHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 99987424304899889987599972799999998599999999818999899999999998499985338999999997
Q ss_pred CCC-CEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 488-3762689888856637999999999619869999788994399999734
Q gi|255764476|r 739 FNR-FVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPS 790 (792)
Q Consensus 739 F~~-F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~ 790 (792)
T Consensus 463 F~PGFSTa~~Vt~lSGRGVGmDVV~~~v~~l~G~v~v~S~~G~GT~F~l~lPl 515 (662)
T PRK10547 463 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTTIRILLPL 515 (662)
T ss_pred HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCC
T ss_conf 17998623223568886646899999999829989999608980799997887