HHsearch alignment for GI: 255764476 and conserved domain: PRK10755
>PRK10755 sensor protein BasS/PmrB; Provisional.
Probab=100.00 E-value=0 Score=355.13 Aligned_cols=227 Identities=23% Similarity=0.348 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88899999999999999999999666632258999999999735777889989999999999999999999999999988
Q gi|255764476|r 553 RALTEKNEALRKADEIKNSFVQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLAT 632 (792)
Q Consensus 553 ~aL~e~~eale~a~~lk~~F~~~vSHELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~ 632 (792)
T Consensus 127 ~~fN~M~~rL~~~~~~qr~Fia~~SHELRTPLt~I~~~lEll~~~~~--------~~~~~~~~~i~rl~~li~~LL~Lar 198 (355)
T PRK10755 127 SALNQLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHH--------IDVAPLIARLDQMMHSVSQLLQLAR 198 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997577740389999999999737575--------3199999999999999999999985
Q ss_pred HHCCCCCCEEEEEC-HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 51498300023306-99999999999999998489689999569860899878999999999988677538886889999
Q gi|255764476|r 633 VDAGIMKLNYSTIV-LNDLLNEVKQSIATKMHENNIRIKVISDGKLGSFVADRQRLLQIFSKILSNAMDFSSKGSTVILK 711 (792)
Q Consensus 633 i~aG~~~l~~~~vd-l~~~i~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~D~~rL~QVl~NLl~NAik~~~~gg~I~i~ 711 (792)
T Consensus 199 ~~~~~~~~~~~~~~ll~~li~~~~~~l~~~~~~~~~~l~~~~~~~~~~v~~D~~lL~~vl~NLi~NAikys~~g~~I~I~ 278 (355)
T PRK10755 199 AGQSFSSGNYQTVKLLEDVILPSYDELSTMLEQRQQTLLLPESAADITVQGDATLLRLLLRNLVENAHRYSPEGSNITIK 278 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 88864345442132599999999999999999759959996588771899689999999999999899748999769999
Q ss_pred EEEECCEEEEEEEECCCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEC-CCCEEEEEEEEC
Q ss_conf 9987998999999788978977865414883762689888856637999999999619869999788-994399999734
Q gi|255764476|r 712 AARDNGDFIFSVKNNGSSIPEDMCKSVFNRFVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSD-EGVTTINCRIPS 790 (792)
Q Consensus 712 ~~~~~~~v~i~V~D~G~GI~~e~~~riF~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~-G~Gttf~v~lP~ 790 (792)
T Consensus 279 l~~~-~~~~i~V~D~G~GI~~e~~~~iFerFyR~d~--~~gGsGLGLaIvk~Iv~~HgG~I~l~s~~~ggGt~~~v~LPk 355 (355)
T PRK10755 279 LQED-GGAVMAVEDEGPGIDESKCGELSKAFVRMDS--RYGGIGLGLSIVSRITQLHHGQFFLQNRQERSGTRAWVWLKK 355 (355)
T ss_pred EEEC-CCEEEEEEECCCCCCHHHHHHHCCCCCCCCC--CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECC
T ss_conf 9977-9889999987999897999885588613899--999875899999999999199899998798987899999479