HHsearch alignment for GI: 255764476 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=100.00 E-value=0 Score=560.04 Aligned_cols=330 Identities=25% Similarity=0.396 Sum_probs=281.2
Q ss_pred HHHHHHHHHHHCCCCEEEEC-CCCEEEEECHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
Q ss_conf 99999999962034328996-89848864058887828987894389838898877763025611468899874026544
Q gi|255764476|r 432 LVKVQGETIDHLSEGVAVFG-PDGRIKLSNPAFRSLWKTEENRLSPGTHIRNIAATCSRYYNESDGWDLFAAIITSFDDE 510 (792)
Q Consensus 432 l~~~q~~~ld~l~e~vav~~-~dgr~~~~N~a~~~l~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 510 (792)
T Consensus 355 ~e~fnr~~i~~apvg~~~l~~~dg~~~~~n~~~~~~~~~~--------------------~~~~--~~~~~~~~~~---- 408 (947)
T PRK10841 355 HEQFNRKIVASAPVGICILRTSDGTNILSNELAHNYLNML--------------------THED--RQRLTQIICG---- 408 (947)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHHHHHHC--------------------CCCH--HHHHHHHHHC----
T ss_conf 8887788986177137999706886331038999987623--------------------7552--8999999861----
Q ss_pred CCEEEEEEEECCEEEEEEEEEECCC-C-CE-EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3115689997250388899997058-8-76-6312320689999888899999999999999999999666632258999
Q gi|255764476|r 511 RKSLQGTLELLSDSVLEYSIIPLPN-A-QT-MLTFVNVTDSVRAERALTEKNEALRKADEIKNSFVQHVSYELRSPLTNI 587 (792)
Q Consensus 511 r~~~~~~~~~~dG~~~~~~~~pl~d-g-~~-l~~~~DIT~~k~~E~aL~e~~eale~a~~lk~~F~~~vSHELrtPLt~I 587 (792)
T Consensus 409 ~~~~~~~~~~~~~~~l~~~~~~~ry~~~~v~~c~~~Disar~~~e~~L~~a~~AAE~AN~AKS~FLAnMSHEIRTPLnGI 488 (947)
T PRK10841 409 QQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSARVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGI 488 (947)
T ss_pred CCCCCEEEEECCCCEEEEEEEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHH
T ss_conf 37883489935985799998653126860799999854078999999999999999999999899875856436128999
Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999973577788998999999999999999999999999998851498300023306999999999999999984896
Q gi|255764476|r 588 IGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYSTIVLNDLLNEVKQSIATKMHENNI 667 (792)
Q Consensus 588 ~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~~vdl~~~i~~~~~~~~~~~~~~~i 667 (792)
T Consensus 489 lG~lELL~~t---~L~~~Qr~~l~tI~~Ss~~LL~lINDILDfSKIEAGkl~Le~~~F~l~~lv~~v~~~~~~~A~~K~L 565 (947)
T PRK10841 489 IGNLDLLQTK---ELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVKKQL 565 (947)
T ss_pred HHHHHHHCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999998079---9998999999999999999999999999999880498479852568999999999999999997398
Q ss_pred EEEEEECCCCCE-EEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHCCCCEECC
Q ss_conf 899995698608-9987899999999998867753888688999999879989999997889789778654148837626
Q gi|255764476|r 668 RIKVISDGKLGS-FVADRQRLLQIFSKILSNAMDFSSKGSTVILKAARDNGDFIFSVKNNGSSIPEDMCKSVFNRFVSNA 746 (792)
Q Consensus 668 ~l~~~~~~~~~~-v~~D~~rL~QVl~NLl~NAik~~~~gg~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~riF~~F~~~~ 746 (792)
T Consensus 566 ~L~~~idp~vP~~v~GDp~RLrQIL~NLLsNAIKFT~~G~-I~L~V~~~~~~L~fsV~DTGIGIsee~~~~LFepF~QaD 644 (947)
T PRK10841 566 GLYCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDTGC-IILHVRVDGDYLSFRVRDTGVGIPAKEVVRLFDPFFQVG 644 (947)
T ss_pred EEEEEECCCCCCCEEECHHHHHHHHHHHHHHHEEECCCCE-EEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCHHHCCC
T ss_conf 7999979999965860688999999998877746679958-999999849999999998289989999998847111578
Q ss_pred CC--CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf 89--8888566379999999996198699997889943999997347
Q gi|255764476|r 747 HR--GQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSK 791 (792)
Q Consensus 747 ~~--~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~ 791 (792)
T Consensus 645 ~S~tR~yGGTGLGLAI~krLVeLMGG~I~VeSe~G~GStFtf~LPL~ 691 (947)
T PRK10841 645 TGVQRNFQGTGLGLAICEKLINMMDGDISVDSEPGMGSQFTVRIPLY 691 (947)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEECC
T ss_conf 75434579987419999999997599589991699807999997564