HHsearch alignment for GI: 255764476 and conserved domain: PRK10935
>PRK10935 nitrate/nitrite sensor protein NarQ; Provisional.
Probab=99.83 E-value=5.6e-17 Score=134.16 Aligned_cols=190 Identities=23% Similarity=0.323 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH
Q ss_conf 996666322589999999----9973577788-99899999999999999999999999999885149830002330699
Q gi|255764476|r 574 QHVSYELRSPLTNIIGFT----DLLKTSKLGS-LNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYSTIVLN 648 (792)
Q Consensus 574 ~~vSHELrtPLt~I~G~a----~lL~~~~~g~-l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~~vdl~ 648 (792)
T Consensus 366 ~~IARELHDsLaQ~Ls~lkiq~~lL~~~l~~~~~~~~~~~~l~~i~~~l~~a~~qlReLl~~fR-------l~l~~~~L~ 438 (568)
T PRK10935 366 ATIARELHDSLAQVLSYLKIQLTLLKRSLPKSCDNAKAESIIADFDEGLSDAYRQLRELLTTFR-------LTIQEANLG 438 (568)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCCCCCHH
T ss_conf 8999984412665789999999999987422565388999999999999999999999999832-------267756879
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHH---HHHHHHHHHHHHHHCCCCCCEEEEEEEEE-CCEEEEEEE
Q ss_conf 99999999999999848968999956986089987899---99999999886775388868899999987-998999999
Q gi|255764476|r 649 DLLNEVKQSIATKMHENNIRIKVISDGKLGSFVADRQR---LLQIFSKILSNAMDFSSKGSTVILKAARD-NGDFIFSVK 724 (792)
Q Consensus 649 ~~i~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~D~~r---L~QVl~NLl~NAik~~~~gg~I~i~~~~~-~~~v~i~V~ 724 (792)
T Consensus 439 ~AL~~~~~~~~~---q~~~~i~l~~~--l~~~~l~~~~~i~llrIvqEALtN~~KHA~-A~~V~V~~~~~~~~~v~l~V~ 512 (568)
T PRK10935 439 SALEEMLDQLRN---QTSAKITLDCR--LPSQALDAQQQVHLLQIIREATLNAIKHAN-ASEIAVSCVTNPDGEVTVSIR 512 (568)
T ss_pred HHHHHHHHHHHH---HCCCEEEEECC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCCEEEEEEE
T ss_conf 999999999975---11946999706--887778888999999999999999998089-987999999748987999997
Q ss_pred ECCCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCC
Q ss_conf 78897897786541488376268988885663799999999961986999978899439999973479
Q gi|255764476|r 725 NNGSSIPEDMCKSVFNRFVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSKE 792 (792)
Q Consensus 725 D~G~GI~~e~~~riF~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~e 792 (792)
T Consensus 513 DnG~Gf~~~~~----------------~~~h~GL~iMrERa~~lgG~l~i~s~p~~GT~V~l~~P~~~ 564 (568)
T PRK10935 513 DDGVGIGELKE----------------PEGHYGLNIMHERASRLGGTLTFSQNPGGGTTVSLTFPSQQ 564 (568)
T ss_pred ECCCCCCCCCC----------------CCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCC
T ss_conf 79947898788----------------89985759999999966998999977999669999858988