HHsearch alignment for GI: 255764476 and conserved domain: PRK10935

>PRK10935 nitrate/nitrite sensor protein NarQ; Provisional.
Probab=99.83  E-value=5.6e-17  Score=134.16  Aligned_cols=190  Identities=23%  Similarity=0.323  Sum_probs=128.6

Q ss_pred             HHHHHHHHHHHHHHHHHH----HHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH
Q ss_conf             996666322589999999----9973577788-99899999999999999999999999999885149830002330699
Q gi|255764476|r  574 QHVSYELRSPLTNIIGFT----DLLKTSKLGS-LNSKQSQYVEYISASSTILLNLVNDILDLATVDAGIMKLNYSTIVLN  648 (792)
Q Consensus       574 ~~vSHELrtPLt~I~G~a----~lL~~~~~g~-l~~~q~e~~~~I~~s~~~l~~li~diLdls~i~aG~~~l~~~~vdl~  648 (792)
T Consensus       366 ~~IARELHDsLaQ~Ls~lkiq~~lL~~~l~~~~~~~~~~~~l~~i~~~l~~a~~qlReLl~~fR-------l~l~~~~L~  438 (568)
T PRK10935        366 ATIARELHDSLAQVLSYLKIQLTLLKRSLPKSCDNAKAESIIADFDEGLSDAYRQLRELLTTFR-------LTIQEANLG  438 (568)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCCCCCHH
T ss_conf             8999984412665789999999999987422565388999999999999999999999999832-------267756879


Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHH---HHHHHHHHHHHHHHCCCCCCEEEEEEEEE-CCEEEEEEE
Q ss_conf             99999999999999848968999956986089987899---99999999886775388868899999987-998999999
Q gi|255764476|r  649 DLLNEVKQSIATKMHENNIRIKVISDGKLGSFVADRQR---LLQIFSKILSNAMDFSSKGSTVILKAARD-NGDFIFSVK  724 (792)
Q Consensus       649 ~~i~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~D~~r---L~QVl~NLl~NAik~~~~gg~I~i~~~~~-~~~v~i~V~  724 (792)
T Consensus       439 ~AL~~~~~~~~~---q~~~~i~l~~~--l~~~~l~~~~~i~llrIvqEALtN~~KHA~-A~~V~V~~~~~~~~~v~l~V~  512 (568)
T PRK10935        439 SALEEMLDQLRN---QTSAKITLDCR--LPSQALDAQQQVHLLQIIREATLNAIKHAN-ASEIAVSCVTNPDGEVTVSIR  512 (568)
T ss_pred             HHHHHHHHHHHH---HCCCEEEEECC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCCEEEEEEE
T ss_conf             999999999975---11946999706--887778888999999999999999998089-987999999748987999997


Q ss_pred             ECCCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCC
Q ss_conf             78897897786541488376268988885663799999999961986999978899439999973479
Q gi|255764476|r  725 NNGSSIPEDMCKSVFNRFVSNAHRGQRRGVGLGLSIVESFINLHGGHVSISSSDEGVTTINCRIPSKE  792 (792)
Q Consensus       725 D~G~GI~~e~~~riF~~F~~~~~~~~~~GtGLGLsiv~~iVe~hgG~I~v~S~~G~Gttf~v~lP~~e  792 (792)
T Consensus       513 DnG~Gf~~~~~----------------~~~h~GL~iMrERa~~lgG~l~i~s~p~~GT~V~l~~P~~~  564 (568)
T PRK10935        513 DDGVGIGELKE----------------PEGHYGLNIMHERASRLGGTLTFSQNPGGGTTVSLTFPSQQ  564 (568)
T ss_pred             ECCCCCCCCCC----------------CCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCC
T ss_conf             79947898788----------------89985759999999966998999977999669999858988