HHsearch alignment for GI: 255764476 and conserved domain: PRK11073
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional.
Probab=98.58 E-value=2.5e-06 Score=61.20 Aligned_cols=113 Identities=18% Similarity=0.222 Sum_probs=73.7
Q ss_pred HHHHHHHHCCCCEEEECCCCEEEEECHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99999843089599984898089853688855099978960499879999989754777664657889999998762467
Q gi|255764476|r 307 HTYEILHNLTVAIAIFDQNRYLQFHNRSFVELWEIDLAFLATNPSNDELLEFLRSANKLPEQLNWKTWKENIFSVYKSSE 386 (792)
Q Consensus 307 r~~e~Ld~l~~~v~ifd~~~rl~~~N~a~~~l~gl~~~~l~~~p~~~~~ld~lr~~~~lpe~~d~~~w~~~~~~~~~~~~ 386 (792)
T Consensus 8 ~~~~Il~~~~d~Iiv~D~~g~I~~~N~aa~~l~g~~~~~~~G~~~~~-l~~~--------~~~~~~~-~~~~~~~~~~~~ 77 (348)
T PRK11073 8 DAGQILNSLINSILLLDDNLAIHYANPAAQQLLAQSSRKLFGTPLPE-LLSY--------FSLNIEL-MQESLQAGQGFT 77 (348)
T ss_pred CHHHHHHHHHHHHEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHHH-HHCC--------CCCCHHH-HHHHHHCCCCCC
T ss_conf 39999986607964998979701283999999785989985996899-8466--------5301899-999997389741
Q ss_pred CCCEEEECCCCCE--EEEEEEECCCCCEEEEECCHHHHHHHHHHHH
Q ss_conf 6502688789818--9999735699868999459579999999999
Q gi|255764476|r 387 THKDTWHLPNGQT--LHVIVTSNPRGGTIWMFENLTVQVDLETKYN 430 (792)
Q Consensus 387 ~~~~~w~l~DGr~--l~v~~~~~p~Gg~~~~~~DITE~~~le~~~~ 430 (792)
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~di~~~k~l~~e~~ 122 (348)
T PRK11073 78 -DNEVTLVIDGRSHILSLTAQRLPEGMILLEMAPMDNQRRLSQEQL 122 (348)
T ss_pred -CCEEEEEECCEEEEEEEEEEECCCCEEEEEEEECHHHHHHHHHHH
T ss_conf -323999989969999999998258689999996279999999999