HHsearch alignment for GI: 255764476 and conserved domain: PRK11360
>PRK11360 sensory histidine kinase AtoS; Provisional.
Probab=98.88 E-value=1.3e-07 Score=69.94 Aligned_cols=115 Identities=13% Similarity=0.111 Sum_probs=71.2
Q ss_pred HHHHHHHHCCCCEEEECCCCEEEEECHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99999843089599984898089853688855099978960499879999989754777664657889999998762467
Q gi|255764476|r 307 HTYEILHNLTVAIAIFDQNRYLQFHNRSFVELWEIDLAFLATNPSNDELLEFLRSANKLPEQLNWKTWKENIFSVYKSSE 386 (792)
Q Consensus 307 r~~e~Ld~l~~~v~ifd~~~rl~~~N~a~~~l~gl~~~~l~~~p~~~~~ld~lr~~~~lpe~~d~~~w~~~~~~~~~~~~ 386 (792)
T Consensus 262 ~~e~IL~sm~dGVIaiD~~G~I~~~N~~A~~llg~~~~e~ig~~~~~l~----------~~-~~~~~~~~~~l~~~~~~~ 330 (607)
T PRK11360 262 LNELIIENAADGIIAIDRQGDITTMNPAAEVITGYQRHELVGQPYSMLF----------DN-TQFYSPVLDTLEHGTEHV 330 (607)
T ss_pred HHHHHHHHHCCEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCCHHHHC----------CC-HHHHHHHHHHHHCCCCCC
T ss_conf 8999986104669999799949998389999858797898596799957----------95-767799999985377421
Q ss_pred CCCEEEECCCCC-EEEEEEEE--CCCC---CEEEEECCHHHHHHHHHHHHHH
Q ss_conf 650268878981-89999735--6998---6899945957999999999999
Q gi|255764476|r 387 THKDTWHLPNGQ-TLHVIVTS--NPRG---GTIWMFENLTVQVDLETKYNTL 432 (792)
Q Consensus 387 ~~~~~w~l~DGr-~l~v~~~~--~p~G---g~~~~~~DITE~~~le~~~~~l 432 (792)
T Consensus 331 ~~~~~~~~~~~~~~l~~~~s~~~~~~g~~~G~v~~~~DiTe~~~le~~l~~~ 382 (607)
T PRK11360 331 ALEISFPGRDRTIELSVTTSRLHDTHGEMIGAVVIFSDLTARKRLQRRMARA 382 (607)
T ss_pred CEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHH
T ss_conf 2489960588349999998535768985889999999577899999999999